RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SCGNO76038 276 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ATG7O95352 703 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PARNO95453 639 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TSPAN19P0C672 248 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PRG2P13727 222 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 MYBPC1Q00872 1141 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 VAC14Q08AM6 782 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ADRM1Q16186 407 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 RSBN1Q5VWQ0 802 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 SEL1L3Q68CR1 1132 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 RASSF6Q6ZTQ3 369 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NT5DC3Q86UY8 548 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 IQCF2Q8IXL9 164 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 FAM71DQ8N9W8 422 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 KAT2BQ92831 832 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ACSF2Q96CM8 615 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NSL1Q96IY1 281 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CBWD1Q9BRT8 395 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ADARB2Q9NS39 739 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ELOVL2Q9NXB9 296 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 USP15Q9Y4E8 981 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NEDD4P46934 1319 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 KAT6AQ92794 2004 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ATP7BP35670 1465 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TRAV19A0A0A6YYK7 116 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PNMA8CA0A1B0GUJ8 204 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CCDC85CA6NKD9 419 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NR5A2O00482 541 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TBX3O15119 743 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CST8O60676 142 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 FAM20BO75063 409 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ATP9AO75110 1047 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 KHDRBS3O75525 346 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ARL3P36405 182 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 SERPINB5P36952 375 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PABPC1LQ4VXU2 614 aaKnown RBP5.69□□□□□ -1.5
SCN1A-209ENST00000635750 MZT2AQ6P582 158 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 ENKURQ8TC29 256 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 CRAMP1Q96RY5 1269 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 LRRC40Q9H9A6 602 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 NECTIN3Q9NQS3 549 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PHF11Q9UIL8 331 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 OR10H1Q9Y4A9 318 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 PCDHB5Q9Y5E4 795 aa5.69□□□□□ -1.5
SCN1A-209ENST00000635750 TEX46H3BTG2 121 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 NMT2O60551 498 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SLC2A4P14672 509 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 CCR1P32246 355 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 IL12RB1P42701 662 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 MMP14P50281 582 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 RPL19P84098 196 aaKnown RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 CCNIQ14094 377 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 PROSER3Q2NL68 480 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 KLHL35Q6PF15 583 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 DENND5BQ6ZUT9 1274 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 IPCEF1Q8WWN9 437 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 HMX1Q9NP08 348 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 GPSM3Q9Y4H4 160 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 NPHP3-ACAD11A0A0J9YXS1 232 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 IQCMA0A1B0GVH7 501 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 MAGEB16A2A368 324 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 C1QTNF3-AMACRE9PGA6 284 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 S100A9P06702 114 aaKnown RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SERPINF2P08697 491 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 OR1E1P30953 314 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SKIV2L2P42285 1042 aaKnown RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 MAGEA4P43358 317 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 GSTM5P46439 218 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 BCL2L1Q07817 233 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 IKBKEQ14164 716 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 TAF8Q7Z7C8 310 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 TRAPPC5Q8IUR0 188 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ADGRG2Q8IZP9 1017 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SLC44A5Q8NCS7 719 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 RHBGQ9H310 441 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 AASDHPPTQ9NRN7 309 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 GPRC5DQ9NZD1 345 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF70Q9UC06 446 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 PYCARDQ9ULZ3 195 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF608Q9ULD9 1512 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ZMYM2Q9UBW7 1377 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 A0A1W2PQC6 194 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 KPNA3O00505 521 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 PGM3O95394 542 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ANXA6P08133 673 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 TFE3P19532 575 aaPredicted RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 UBA1P22314 1058 aaKnown RBP5.68□□□□□ -1.5
SCN1A-209ENST00000635750 EPHX2P34913 555 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 PIK3CGP48736 1102 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 DSG1Q02413 1049 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 LONRF1Q17RB8 773 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 ERMARDQ5T6L9 678 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 GALNT18Q6P9A2 607 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 BARGINQ6ZT62 677 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 GLT6D1Q7Z4J2 308 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 EXOC3L1Q86VI1 746 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 SUN3Q8TAQ9 357 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 COL26A1Q96A83 441 aa5.68□□□□□ -1.5
SCN1A-209ENST00000635750 MXRA8Q9BRK3 442 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms