RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 USP4Q13107 963 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 RUNX3Q13761 415 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 HS1BP3Q53T59 392 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 DCAF6Q58WW2 860 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 DNAJC24Q6P3W2 148 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 KLHDC10Q6PID8 442 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 TXNDC11Q6PKC3 985 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 H2AFVQ71UI9 128 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 RSRC2Q7L4I2 434 aaKnown RBP19.43■□□□□ 0.7
PNKP-224ENST00000631020 ARCQ7LC44 396 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 TRIM11Q96F44 468 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 ZFRQ96KR1 1074 aaKnown RBP19.43■□□□□ 0.7
PNKP-224ENST00000631020 SELENOOQ9BVL4 669 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 SFMBT1Q9UHJ3 866 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 ARHGAP26Q9UNA1 814 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 PCDHA13Q9Y5I0 950 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 OTOGLQ3ZCN5 2332 aa19.43■□□□□ 0.7
PNKP-224ENST00000631020 CAPN9O14815 690 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 DAB1O75553 588 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 PAPSS2O95340 614 aaPredicted RBP19.42■□□□□ 0.7
PNKP-224ENST00000631020 CYP1A2P05177 515 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 CKMP06732 381 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 MATKP42679 507 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 MAGEA1P43355 309 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 NRLP54845 237 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 EFEMP1Q12805 493 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 CCINQ13939 588 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 ZNF77Q15935 545 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 MSANTD2Q6P1R3 559 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 SPEM1Q8N4L4 309 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 CCDC112Q8NEF3 446 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 DQX1Q8TE96 717 aaKnown RBP19.42■□□□□ 0.7
PNKP-224ENST00000631020 RNF139Q8WU17 664 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 KLF16Q9BXK1 252 aaPredicted RBP19.42■□□□□ 0.7
PNKP-224ENST00000631020 ADAM33Q9BZ11 813 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 HPS4Q9NQG7 708 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 PARVAQ9NVD7 372 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 DNMT3LQ9UJW3 386 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 TFR2Q9UP52 801 aa19.42■□□□□ 0.7
PNKP-224ENST00000631020 EP300Q09472 2414 aaPredicted RBP19.42■□□□□ 0.7
PNKP-224ENST00000631020 LILRB5O75023 590 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 PTMAP06454 111 aaKnown RBP19.41■□□□□ 0.7
PNKP-224ENST00000631020 MBL2P11226 248 aaPredicted RBP19.41■□□□□ 0.7
PNKP-224ENST00000631020 TDGF1P13385 188 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 TFE3P19532 575 aaPredicted RBP19.41■□□□□ 0.7
PNKP-224ENST00000631020 NOS2P35228 1153 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 SPA17Q15506 151 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 C10orf76Q5T2E6 689 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 MIB1Q86YT6 1006 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 ACRBPQ8NEB7 543 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 RIN3Q8TB24 985 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 ADAM32Q8TC27 787 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 OSCP1Q8WVF1 389 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 ATRIPQ8WXE1 791 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 NT5C3BQ969T7 300 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 ZNF830Q96NB3 372 aaPredicted RBP19.41■□□□□ 0.7
PNKP-224ENST00000631020 MCEEQ96PE7 176 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 CDK5RAP1Q96SZ6 601 aaKnown RBP19.41■□□□□ 0.7
PNKP-224ENST00000631020 TRIM62Q9BVG3 475 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 TRIM7Q9C029 511 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 NACA2Q9H009 215 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 KCNF1Q9H3M0 494 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 OLA1Q9NTK5 396 aaKnown RBP19.41■□□□□ 0.7
PNKP-224ENST00000631020 SMPD4Q9NXE4 827 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.41■□□□□ 0.7
PNKP-224ENST00000631020 MARCH2Q9P0N8 246 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 CALCOCO1Q9P1Z2 691 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 RCCD1A6NED2 376 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 TMEM191CA6NGB0 347 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 C2CD4BA6NLJ0 364 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 ESPNB1AK53 854 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 TMEM253P0C7T8 217 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 OTUD1Q5VV17 481 aaPredicted RBP19.41■□□□□ 0.7
PNKP-224ENST00000631020 TADA2BQ86TJ2 420 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 RXFP2Q8WXD0 754 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 WBP2Q969T9 261 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 CFAP57Q96MR6 1250 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 NPY6RQ99463 290 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 DESI2Q9BSY9 194 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 EBF3Q9H4W6 596 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 RASAL2Q9UJF2 1139 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 CPQQ9Y646 472 aa19.41■□□□□ 0.7
PNKP-224ENST00000631020 TRDMT1O14717 391 aaKnown RBP19.4■□□□□ 0.7
PNKP-224ENST00000631020 ARHGAP6O43182 974 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 MSI1O43347 362 aaKnown RBP19.4■□□□□ 0.7
PNKP-224ENST00000631020 IGLV3-25P01717 112 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 CXCL12P48061 93 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 OGDHQ02218 1023 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 EIF4EBP2Q13542 120 aaPredicted RBP19.4■□□□□ 0.7
PNKP-224ENST00000631020 GAS6Q14393 721 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 PON2Q15165 354 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 CCDC14Q49A88 953 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 TAC4Q86UU9 113 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 SUMF1Q8NBK3 374 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 CTNNBL1Q8WYA6 563 aaPredicted RBP19.4■□□□□ 0.7
PNKP-224ENST00000631020 EXOC4Q96A65 974 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 INTUQ9ULD6 942 aa19.4■□□□□ 0.7
PNKP-224ENST00000631020 FRYLO94915 3013 aa19.39■□□□□ 0.69
PNKP-224ENST00000631020 TRUB2O95900 331 aaKnown RBP19.39■□□□□ 0.69
PNKP-224ENST00000631020 PDGFRAP16234 1089 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms