RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ZCCHC9Q8N567 271 aaKnown RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 C3orf58Q8NDZ4 430 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 CCHCR1Q8TD31 782 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 SERPINB12Q96P63 405 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 KCTD15Q96SI1 283 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 MTG1Q9BT17 334 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 EPB41L4BQ9H329 900 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 C20orf96Q9NUD7 363 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 USP15Q9Y4E8 981 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 GOLGA8QA0A0J9YX86 632 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 GOLGA8OA6NCC3 632 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 GOLGA8NF8WBI6 632 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 DNM1LO00429 736 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 ABLIM1O14639 778 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 ITGBL1O95965 494 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 MT-CYBP00156 380 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 ENO1P06733 434 aaKnown RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 TNFRSF8P28908 595 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 EPHB1P54762 984 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 SLC12A2P55011 1212 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 KCNJ2P63252 427 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 NOMO1Q15155 1222 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 NOMO2Q5JPE7 1267 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 EFHC1Q5JVL4 640 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 LDB1Q86U70 411 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 HTR3CQ8WXA8 447 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 CDKL2Q92772 493 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 CSPG4P5Q96PW8 444 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 SENP6Q9GZR1 1112 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 FBXO6Q9NRD1 293 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 PIGVQ9NUD9 493 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 ZNF358Q9NW07 568 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 SLC12A6Q9UHW9 1150 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 TRIM17Q9Y577 477 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 COL2A1P02458 1487 aaPredicted RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 PHGDHO43175 533 aaKnown RBP7.75□□□□□ -1.17
PKP4-217ENST00000628904 FAM189A1O60320 539 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 DGKIO75912 1065 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 SCTRP47872 440 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 SKOR1P84550 965 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 GHRHRQ02643 423 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 SLC12A1Q13621 1099 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 ANO4Q32M45 955 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 CERCAMQ5T4B2 595 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 SAPCD2Q86UD0 394 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 SHCBP1Q8NEM2 672 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 BEGAINQ9BUH8 593 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 ZCWPW1Q9H0M4 648 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 ADAM7Q9H2U9 754 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 CYP4F12Q9HCS2 524 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 PAK5Q9P286 719 aa7.75□□□□□ -1.17
PKP4-217ENST00000628904 ARFGEF1Q9Y6D6 1849 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 MANSC4A6NHS7 340 aaPredicted RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 CCT8L1PA6NM43 557 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 TSPAN8P19075 237 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 IVDP26440 423 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 CSE1LP55060 971 aaKnown RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 SLC10A2Q12908 348 aaPredicted RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 FOXD4Q12950 439 aaPredicted RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 KLF1Q13351 362 aaPredicted RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 ITGA7Q13683 1181 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 DLG2Q15700 870 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 ZNF280BQ86YH2 543 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 MYLK4Q86YV6 388 aaPredicted RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 CDKL3Q8IVW4 592 aaPredicted RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 STAMBPL1Q96FJ0 436 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 P2RY11Q96G91 374 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 HTTP42858 3142 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 TTC3P53804 2025 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 A6NNZ2 444 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 GPR182O15218 404 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 GPR32O75388 356 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 F2P00734 622 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 LTFP02788 710 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 DRD4P21917 467 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 STIP1P31948 543 aaKnown RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 FOXN2P32314 431 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 CRYBB1P53674 252 aaPredicted RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 PURAQ00577 322 aaKnown RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 TUBB8Q3ZCM7 444 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 CTXN3Q4LDR2 81 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 ANKRD20A2Q5SQ80 823 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 RNASEH2BQ5TBB1 312 aaKnown RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 ANKRD20A1Q5TYW2 823 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 CROCCP2Q86T23 111 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 FAM35AQ86V20 835 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 POU5F2Q8N7G0 328 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 EFHBQ8N7U6 833 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 MICAL1Q8TDZ2 1067 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 ATP2A3Q93084 1043 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 MFSD3Q96ES6 412 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 RPRD1AQ96P16 312 aaPredicted RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 APBA2Q99767 749 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 TSSK1BQ9BXA7 367 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 SLC40A1Q9NP59 571 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 MAN1C1Q9NR34 630 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 IARS2Q9NSE4 1012 aaKnown RBP7.74□□□□□ -1.17
PKP4-217ENST00000628904 RNF186Q9NXI6 227 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 BFARQ9NZS9 450 aa7.74□□□□□ -1.17
PKP4-217ENST00000628904 ZFP69BQ9UJL9 534 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms