RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 LRSAM1Q6UWE0 723 aa17.26■□□□□ 0.35
TRIM29-221ENST00000627238 HSCBQ8IWL3 235 aa17.26■□□□□ 0.35
TRIM29-221ENST00000627238 FBXL13Q8NEE6 735 aa17.26■□□□□ 0.35
TRIM29-221ENST00000627238 BAHD1Q8TBE0 780 aaPredicted RBP17.26■□□□□ 0.35
TRIM29-221ENST00000627238 SEMA4DQ92854 862 aa17.26■□□□□ 0.35
TRIM29-221ENST00000627238 HEXIM2Q96MH2 286 aaKnown RBP17.26■□□□□ 0.35
TRIM29-221ENST00000627238 RAB20Q9NX57 234 aa17.26■□□□□ 0.35
TRIM29-221ENST00000627238 PCOLCE2Q9UKZ9 415 aa17.26■□□□□ 0.35
TRIM29-221ENST00000627238 CLEC4EQ9ULY5 219 aa17.26■□□□□ 0.35
TRIM29-221ENST00000627238 PLXNB3Q9ULL4 1909 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 TAF4O00268 1085 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 SYNCRIPO60506 623 aaKnown RBP17.25■□□□□ 0.35
TRIM29-221ENST00000627238 DKK1O94907 266 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 MXI1P50539 228 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 SLC8A3P57103 927 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 RING1Q06587 406 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 CAMK2GQ13555 558 aaPredicted RBP17.25■□□□□ 0.35
TRIM29-221ENST00000627238 ZNF394Q53GI3 561 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 DCAF12L1Q5VU92 463 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 CCNI2Q6ZMN8 369 aaPredicted RBP17.25■□□□□ 0.35
TRIM29-221ENST00000627238 KIAA0907Q7Z7F0 614 aaPredicted RBP17.25■□□□□ 0.35
TRIM29-221ENST00000627238 DENND1CQ8IV53 801 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 SCML4Q8N228 414 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRIM29-221ENST00000627238 ERLEC1Q96DZ1 483 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 IRX2Q9BZI1 471 aaPredicted RBP17.25■□□□□ 0.35
TRIM29-221ENST00000627238 TMEM245Q9H330 911 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 FBRSQ9HAH7 460 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 OSGEPQ9NPF4 335 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 OLA1Q9NTK5 396 aaKnown RBP17.25■□□□□ 0.35
TRIM29-221ENST00000627238 APOBEC2Q9Y235 224 aaKnown RBP17.25■□□□□ 0.35
TRIM29-221ENST00000627238 COQ4Q9Y3A0 265 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 HBS1LQ9Y450 684 aaKnown RBP17.25■□□□□ 0.35
TRIM29-221ENST00000627238 PCDHB9Q9Y5E1 797 aa17.25■□□□□ 0.35
TRIM29-221ENST00000627238 SLC12A8A0AV02 714 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 XPO1O14980 1071 aaKnown RBP17.24■□□□□ 0.35
TRIM29-221ENST00000627238 BCAT2O15382 392 aaPredicted RBP17.24■□□□□ 0.35
TRIM29-221ENST00000627238 STX10O60499 249 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 CER1O95813 267 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 ZBED1O96006 694 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 PRR29P0C7W0 189 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 PRKCHP24723 683 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 HOXD9P28356 352 aaPredicted RBP17.24■□□□□ 0.35
TRIM29-221ENST00000627238 NDUFA8P51970 172 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 BNC1Q01954 994 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 MPPE1Q53F39 396 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 RSRC2Q7L4I2 434 aaKnown RBP17.24■□□□□ 0.35
TRIM29-221ENST00000627238 ZCCHC9Q8N567 271 aaKnown RBP17.24■□□□□ 0.35
TRIM29-221ENST00000627238 OR2T3Q8NH03 318 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 WFIKKN2Q8TEU8 576 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 PTPRBP23467 1997 aa17.24■□□□□ 0.35
TRIM29-221ENST00000627238 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
TRIM29-221ENST00000627238 HMBSP08397 361 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 ACADMP11310 421 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 HLA-FP30511 346 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 MATKP42679 507 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 TKTL1P51854 596 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 BCAT1P54687 386 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 DDI1Q8WTU0 396 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 ARID3AQ99856 593 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 ULBP1Q9BZM6 244 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 LHX6Q9UPM6 363 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 MAPK8IP1Q9UQF2 711 aa17.23■□□□□ 0.35
TRIM29-221ENST00000627238 A0A1W2PQ27 194 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 A0A1W2PQ64 194 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 EPHX1P07099 455 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 HARS2P49590 506 aaKnown RBP17.22■□□□□ 0.35
TRIM29-221ENST00000627238 KRT85P78386 507 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 ZBTB16Q05516 673 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 SCAPQ12770 1279 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 MPP7Q5T2T1 576 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 SERPINA13PQ6UXR4 307 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 KRBA2Q6ZNG9 492 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 ZC3H3Q8IXZ2 948 aaKnown RBP17.22■□□□□ 0.35
TRIM29-221ENST00000627238 KCTD13Q8WZ19 329 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 CIPCQ9C0C6 399 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 GAREM1Q9H706 876 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 MMRN2Q9H8L6 949 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 TM7SF3Q9NS93 570 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 TOR4AQ9NXH8 423 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 DKK4Q9UBT3 224 aa17.22■□□□□ 0.35
TRIM29-221ENST00000627238 FASNP49327 2511 aaKnown RBP17.21■□□□□ 0.35
TRIM29-221ENST00000627238 TULP2O00295 520 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 FLRT2O43155 660 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 HOXB3P14651 431 aaPredicted RBP17.21■□□□□ 0.35
TRIM29-221ENST00000627238 AFF3P51826 1226 aaKnown RBP17.21■□□□□ 0.35
TRIM29-221ENST00000627238 BST2Q10589 180 aaKnown RBP17.21■□□□□ 0.35
TRIM29-221ENST00000627238 HLA-BQ31612 363 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 COBLL1Q53SF7 1204 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 ADGRF1Q5T601 910 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 SLCO6A1Q86UG4 719 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 ADIPOR2Q86V24 386 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 FMNL3Q8IVF7 1028 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 SORCS1Q8WY21 1168 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 CDC6Q99741 560 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 MIR1-1HGQ9H1L0 117 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 IL21RQ9HBE5 538 aa17.21■□□□□ 0.35
TRIM29-221ENST00000627238 EIF2B4Q9UI10 523 aaKnown RBP17.21■□□□□ 0.35
TRIM29-221ENST00000627238 TSPAN16Q9UKR8 245 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms