RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 BEST1O76090 585 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 ALX3O95076 343 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 OAS1P00973 400 aaKnown RBP6.73□□□□□ -1.33
TCF4-249ENST00000625716 CHRNB1P11230 501 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 RALAP11233 206 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 ARSAP15289 507 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 TCF3P15923 654 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 BMP6P22004 513 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 SOX18P35713 384 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 ATP5C1P36542 298 aaKnown RBP6.73□□□□□ -1.33
TCF4-249ENST00000625716 CXCL12P48061 93 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 TUBP50607 506 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 RAD23BP54727 409 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 SETDB1Q15047 1291 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 SNX30Q5VWJ9 437 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 C16orf46Q6P387 395 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 FAM114A1Q8IWE2 563 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 ARHGAP18Q8N392 663 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 PPM1KQ8N3J5 372 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 SPEM1Q8N4L4 309 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 KIAA1958Q8N8K9 716 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 ANKRD52Q8NB46 1076 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 SLC4A11Q8NBS3 891 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 CD101Q93033 1021 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 COL26A1Q96A83 441 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 CDK5RAP1Q96SZ6 601 aaKnown RBP6.73□□□□□ -1.33
TCF4-249ENST00000625716 ARID3AQ99856 593 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 P2RY13Q9BPV8 354 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 FAM126AQ9BYI3 521 aaPredicted RBP6.73□□□□□ -1.33
TCF4-249ENST00000625716 UBXN6Q9BZV1 441 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 RNF38Q9H0F5 515 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 NUP62CLQ9H1M0 184 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 LINC00597Q9H2U6 94 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 CHRDQ9H2X0 955 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 ECT2Q9H8V3 914 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 PNPLA8Q9NP80 782 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 HPS4Q9NQG7 708 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 IL37Q9NZH6 218 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 GMIPQ9P107 970 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 LSM7Q9UK45 103 aaKnown RBP6.73□□□□□ -1.33
TCF4-249ENST00000625716 TRIM33Q9UPN9 1127 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 SCML2Q9UQR0 700 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 PCDHB4Q9Y5E5 795 aa6.73□□□□□ -1.33
TCF4-249ENST00000625716 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 E2F8A0AVK6 867 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 FAM92AA1XBS5 289 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 SHISA7A6NL88 538 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 PROB1E7EW31 1015 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 TRDMT1O14717 391 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 CYP26A1O43174 497 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 COCHO43405 550 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 TLR5O60602 858 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 OLFM2O95897 454 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 LMNAP02545 664 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 PAEPP09466 180 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 IRF1P10914 325 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 VDRP11473 427 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 RARGP13631 454 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 DRD1P21728 446 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 BRD2P25440 801 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 GJA4P35212 333 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 MTIF2P46199 727 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 GALK1P51570 392 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 KIF11P52732 1056 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 BST2Q10589 180 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 FZD5Q13467 585 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 NAA30Q147X3 362 aaPredicted RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 STILQ15468 1287 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 GOLGA7BQ2TAP0 167 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 FBXO43Q4G163 708 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 PREPLQ4J6C6 727 aaPredicted RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 TMEM196Q5HYL7 178 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 C10orf120Q5SQS8 335 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 BTBD8Q5XKL5 378 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 ARHGAP17Q68EM7 881 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 TXNDC11Q6PKC3 985 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 TMEM270Q6UE05 265 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 RSRC2Q7L4I2 434 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 CCDC186Q7Z3E2 898 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 TRIM59Q8IWR1 403 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 IL22RA1Q8N6P7 574 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 ZMIZ2Q8NF64 920 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 SECISBP2LQ93073 1101 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 OTUB2Q96DC9 234 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 CNOT6LQ96LI5 555 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 FAM81BQ96LP2 452 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 IPO9Q96P70 1041 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 CCSER2Q9H7U1 834 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 LRRC4Q9HBW1 653 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 RBM12Q9NTZ6 932 aaKnown RBP6.72□□□□□ -1.33
TCF4-249ENST00000625716 ZSCAN32Q9NX65 697 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 TSPAN16Q9UKR8 245 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 SLC8A2Q9UPR5 921 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 PCDHGA2Q9Y5H1 932 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 R4GN57 208 aa6.72□□□□□ -1.33
TCF4-249ENST00000625716 NUP210Q8TEM1 1887 aaPredicted RBP6.71□□□□□ -1.34
TCF4-249ENST00000625716 A0A1W2PQH9 124 aa6.71□□□□□ -1.34
TCF4-249ENST00000625716 PRR23AA6NEV1 266 aa6.71□□□□□ -1.34
TCF4-249ENST00000625716 OTOL1A6NHN0 477 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms