RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 ADAM28Q9UKQ2 775 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 NR2E3Q9Y5X4 410 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 C5orf60A6NFR6 353 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 FOXO6A8MYZ6 492 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 HACD1B0YJ81 288 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 METTL18O95568 372 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 CXCL10P02778 98 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 HCAR3P49019 387 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 GPR15P49685 360 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 YWHAGP61981 247 aaKnown RBP eCLIP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 MTM1Q13496 603 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 PRKD1Q15139 912 aaPredicted RBP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 SYCP2LQ5T4T6 812 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 ANKRD33Q7Z3H0 272 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 SCD5Q86SK9 330 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 IGDCC3Q8IVU1 814 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 TP53INP2Q8IXH6 220 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 AGGF1Q8N302 714 aaeCLIP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 TFB1MQ8WVM0 346 aaKnown RBP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 B3GALT6Q96L58 329 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 LGMNQ99538 433 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 WDCPQ9H6R7 721 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 CNOT10Q9H9A5 744 aaKnown RBP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 VPS37BQ9H9H4 285 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 ABI2Q9NYB9 513 aaPredicted RBP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 LRFN2Q9ULH4 789 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 SNX10Q9Y5X0 201 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 TTC3P53804 2025 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 E7EVH7 732 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 IVLP07476 585 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 ERCC2P18074 760 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 FGFR3P22607 806 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 ATN1P54259 1190 aaPredicted RBP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 FAAP100Q0VG06 881 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 IFRD2Q12894 506 aaPredicted RBP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 ZSCAN26Q16670 478 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 ARL13BQ3SXY8 428 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 FAM171A1Q5VUB5 890 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 FOXR1Q6PIV2 292 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 C4orf22Q6V702 233 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 SLC39A5Q6ZMH5 540 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 CAPN12Q6ZSI9 719 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 FAM43BQ6ZT52 329 aaPredicted RBP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 BZW1Q7L1Q6 419 aaKnown RBP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 NPAS4Q8IUM7 802 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 SCN4BQ8IWT1 228 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 PDIK1LQ8N165 341 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 FBXO36Q8NEA4 188 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 PYROXD1Q8WU10 500 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 HTR3CQ8WXA8 447 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 ARHGEF2Q92974 986 aaKnown RBP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 FUBP3Q96I24 572 aaKnown RBP eCLIP13.67□□□□□ -0.22
C3orf56-201ENST00000624688 CCDC77Q9BR77 488 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 TKTL2Q9H0I9 626 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 PLXNA3P51805 1871 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 MYO16Q9Y6X6 1858 aa13.67□□□□□ -0.22
C3orf56-201ENST00000624688 FNDC1Q4ZHG4 1894 aaPredicted RBP13.66□□□□□ -0.22
C3orf56-201ENST00000624688 CDH16O75309 829 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 ALDH2P05091 517 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 CHN1P15882 459 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 CREB1P16220 341 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 SSTR1P30872 391 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
C3orf56-201ENST00000624688 CCL23P55773 120 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 TPI1P60174 286 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 NFE2Q16621 373 aaPredicted RBP13.66□□□□□ -0.22
C3orf56-201ENST00000624688 BBS9Q3SYG4 887 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 CTXN3Q4LDR2 81 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 SDHAF4Q5VUM1 108 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 HEATR6Q6AI08 1181 aaKnown RBP13.66□□□□□ -0.22
C3orf56-201ENST00000624688 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 TDRPQ86YL5 185 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 TTC9BQ8N6N2 239 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 STKLD1Q8NE28 680 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 MAML1Q92585 1016 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 C8orf48Q96LL4 319 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 SELENOSQ9BQE4 189 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 TRIM62Q9BVG3 475 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 KLC2Q9H0B6 622 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 EPN3Q9H201 632 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 RABEP2Q9H5N1 569 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 NMUR1Q9HB89 426 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 ABCC13Q9NSE7 274 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 RABGEF1Q9UJ41 708 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 TEX264Q9Y6I9 313 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 CEP350Q5VT06 3117 aa13.66□□□□□ -0.22
C3orf56-201ENST00000624688 EXOC1LA0A1B0GW35 172 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 SRRM3A6NNA2 597 aaPredicted RBP13.65□□□□□ -0.22
C3orf56-201ENST00000624688 IRAK2O43187 625 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 AVILO75366 819 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 GALTP07902 379 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 ELK3P41970 407 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 GLUD2P49448 558 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 PDK1Q15118 436 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 DDR2Q16832 855 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 ANKRD20A2Q5SQ80 823 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 ARTNQ5T4W7 220 aa13.65□□□□□ -0.22
C3orf56-201ENST00000624688 ANKRD20A1Q5TYW2 823 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms