RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 USP50Q70EL3 339 aaPredicted RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 XYLT1Q86Y38 959 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 KCTD6Q8NC69 237 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 OR6J1Q8NGC5 347 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 NDRG1Q92597 394 aaKnown RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 APOPT1Q96IL0 206 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 GJD2Q9UKL4 321 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 MGAMO43451 1857 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 COPEO14579 308 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 DHRS4L1P0CG22 281 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 TFE3P19532 575 aaPredicted RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 MIPP30301 263 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 ATXN1P54253 815 aaKnown RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 TMPRSS15P98073 1019 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 HIC1Q14526 733 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 ZNF618Q5T7W0 954 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 LRRC38Q5VT99 294 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 RIPOR1Q6ZS17 1223 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 PCGF5Q86SE9 256 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 GATA6Q92908 595 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 ALKBH8Q96BT7 664 aaKnown RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 PANX3Q96QZ0 392 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 RNF39Q9H2S5 420 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 BARX2Q9UMQ3 279 aaPredicted RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 WDR37Q9Y2I8 494 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 OTOFQ9HC10 1997 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 LAMA3Q16787 3333 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 IQANK1A0A1B0GTG1 560 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 AP3M2P53677 418 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 YWHAEP62258 255 aaKnown RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 PLOD1Q02809 727 aaPredicted RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 TMED1Q13445 227 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 DPYSL3Q14195 570 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 PIGHQ14442 188 aaPredicted RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 C1orf228Q6PIY5 440 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 CXorf38Q8TB03 319 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 DPEP3Q9H4B8 488 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 NXF3Q9H4D5 531 aaKnown RBP13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 PPCSQ9HAB8 311 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 TSPAN16Q9UKR8 245 aa13.84□□□□□ -0.19
PCDHB17P-202ENST00000623466 DNAJC6O75061 913 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 CILPO75339 1184 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 KDELR1P24390 212 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 UBAP2LQ14157 1087 aaKnown RBP13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 CCL14Q16627 93 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 PPP1R26Q5T8A7 1209 aaPredicted RBP13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 SH2D5Q6ZV89 423 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 CATSPER4Q7RTX7 472 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 CCDC110Q8TBZ0 833 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 SPATA18Q8TC71 538 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 CLEC4CQ8WTT0 213 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 SLC44A1Q8WWI5 657 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 PEBP4Q96S96 227 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 ADPGKQ9BRR6 497 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 TUBB6Q9BUF5 446 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 C20orf27Q9GZN8 174 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 NGRNQ9NPE2 291 aaKnown RBP13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 STRIP2Q9ULQ0 834 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 PPM1HQ9ULR3 514 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 NME7Q9Y5B8 376 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 A0A0G2JMZ2 1700 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 E7ESA3 106 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 GPD2P43304 727 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 AQP5P55064 265 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 SLC25A11Q02978 314 aaKnown RBP13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 CHI3L2Q15782 390 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 SMAD1Q15797 465 aaKnown RBP13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 NCCRP1Q6ZVX7 275 aaPredicted RBP13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 SCUBE1Q8IWY4 988 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 DNAJB3Q8WWF6 145 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 RILPQ96NA2 401 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 TUBGCP5Q96RT8 1024 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 SPATA16Q9BXB7 569 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 SHCBP1LQ9BZQ2 653 aa13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 DDX56Q9NY93 547 aaKnown RBP13.83□□□□□ -0.2
PCDHB17P-202ENST00000623466 MAGEA13PA6NCF6 341 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 CCDC166P0CW27 439 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 ANPEPP15144 967 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 PDGFRAP16234 1089 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 BTG3Q14201 252 aaPredicted RBP13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 SURF1Q15526 300 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 ZNF484Q5JVG2 852 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 PMF1Q6P1K2 205 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 SMYD1Q8NB12 490 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 OR6B3Q8NGW1 331 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 TMEM40Q8WWA1 233 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 RXFP2Q8WXD0 754 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 EBF4Q9BQW3 602 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 FAM192AQ9GZU8 254 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 CNTN3Q9P232 1028 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 SLC7A8Q9UHI5 535 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 SIP14410 1827 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 PRR5-ARHGAP8B1AHC4 643 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 GAS2O43903 313 aaKnown RBP13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 SLC26A2P50443 739 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 CCNA1P78396 465 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 ARHGAP8P85298 464 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 ENPEPQ07075 957 aa13.82□□□□□ -0.2
PCDHB17P-202ENST00000623466 KRT72Q14CN4 511 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms