RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 EMCNQ9ULC0 261 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 AK5Q9Y6K8 562 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 ARID2Q68CP9 1835 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
NPHP4-211ENST00000622020 DGKIO75912 1065 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 RAG1P15918 1043 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 PPP2R5DQ14738 602 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 FRMD7Q6ZUT3 714 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 SATL1Q86VE3 508 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 NCAPG2Q86XI2 1143 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 ADAM32Q8TC27 787 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 HPDLQ96IR7 371 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 TMPRSS4Q9NRS4 437 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 TMEM216Q9P0N5 145 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 NEMP1O14524 444 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 USP12O75317 370 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 RTN3O95197 1032 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-211ENST00000622020 GSRP00390 522 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 PGK2P07205 417 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 STAG3L1P0CL83 205 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 FGF3P11487 239 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-211ENST00000622020 SAT1P21673 171 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 CRABP2P29373 138 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 SDC4P31431 198 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 MED21Q13503 144 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 CCNIQ14094 377 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 MMEL1Q495T6 779 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 AGBL3Q8NEM8 1001 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 TRAPPC9Q96Q05 1148 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 CXCL16Q9H2A7 254 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 GINS2Q9Y248 185 aa16.26■□□□□ 0.19
NPHP4-211ENST00000622020 ZNF646O15015 1829 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-211ENST00000622020 MYOCOSA0A1B0GUC4 107 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 ARIH2O95376 493 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 TSHRP16473 764 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 MGAT1P26572 445 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 CCNFP41002 786 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 GRIA2P42262 883 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 GOLGA7BQ2TAP0 167 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 PPP1R26Q5T8A7 1209 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-211ENST00000622020 MBLAC2Q68D91 279 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 MTHFD1LQ6UB35 978 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 AGAP3Q96P47 875 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 PNPLA8Q9NP80 782 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 ZNF180Q9UJW8 692 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 CCDC160A6NGH7 325 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 CAPN8A6NHC0 703 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 SPDYE16A6NNV3 312 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-211ENST00000622020 SERPINB5P36952 375 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 TUBB3Q13509 450 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 LIN52Q52LA3 116 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 PDPK2PQ6A1A2 396 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 NDRG1Q92597 394 aaKnown RBP16.25■□□□□ 0.19
NPHP4-211ENST00000622020 PPP2R3CQ969Q6 453 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 SPATA16Q9BXB7 569 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 PPP1R1BQ9UD71 204 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-211ENST00000622020 PCDHGB4Q9UN71 923 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 PCDHGB5Q9Y5G0 923 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 CEP350Q5VT06 3117 aa16.25■□□□□ 0.19
NPHP4-211ENST00000622020 TRDMT1O14717 391 aaKnown RBP16.24■□□□□ 0.19
NPHP4-211ENST00000622020 AIM2O14862 343 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 ENDOD1O94919 500 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 PYGLP06737 847 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 TYK2P29597 1187 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 IDH3AP50213 366 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 WASHC5Q12768 1159 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 MSLNQ13421 630 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-211ENST00000622020 LAMB3Q13751 1172 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 EFCAB12Q6NXP0 572 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 SEPT1Q8WYJ6 367 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 BCO2Q9BYV7 579 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 NRDE2Q9H7Z3 1164 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 XPNPEP3Q9NQH7 507 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 CDH22Q9UJ99 828 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-211ENST00000622020 FAM159BA6NKW6 160 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 TNFAIP1Q13829 316 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 IER5Q5VY09 327 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 FAM160B1Q5W0V3 765 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 HEATR6Q6AI08 1181 aaKnown RBP16.24■□□□□ 0.19
NPHP4-211ENST00000622020 PPP4R1Q8TF05 950 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 NR1H4Q96RI1 486 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-211ENST00000622020 EPAS1Q99814 870 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 GORASP1Q9BQQ3 440 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 CAB39LQ9H9S4 337 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 POMPQ9Y244 141 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 GOLGA8TH3BQL2 631 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 CFLARO15519 480 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 TBL3Q12788 808 aaKnown RBP16.24■□□□□ 0.19
NPHP4-211ENST00000622020 PCLAFQ15004 111 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 DLG2Q15700 870 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 MICALL2Q8IY33 904 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 CCNYQ8ND76 341 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 UBE2OQ9C0C9 1292 aaKnown RBP16.24■□□□□ 0.19
NPHP4-211ENST00000622020 DDX43Q9NXZ2 648 aaKnown RBP16.24■□□□□ 0.19
NPHP4-211ENST00000622020 PCDHA11Q9Y5I1 949 aa16.24■□□□□ 0.19
NPHP4-211ENST00000622020 B4GALT4O60513 344 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 LCP1P13796 627 aa16.23■□□□□ 0.19
NPHP4-211ENST00000622020 VCLP18206 1134 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms