RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NSUN2Q08J23 767 aaKnown RBP eCLIP5.08□□□□□ -1.6
BRCA1-229ENST00000621897 MAPKAPK3Q16644 382 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 P3H1Q32P28 736 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 KSR2Q6VAB6 950 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 ARFGAP1Q8N6T3 406 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 OR52L2PQ8NGH6 319 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 OVCA2Q8WZ82 227 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 GJA10Q969M2 543 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 SENP7Q9BQF6 1050 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 ELOVL1Q9BW60 279 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 MOV10Q9HCE1 1003 aaKnown RBP5.08□□□□□ -1.6
BRCA1-229ENST00000621897 ZBTB40Q9NUA8 1239 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 TMEM45AQ9NWC5 275 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 HS3ST3B1Q9Y662 390 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 TTC34A8MYJ7 566 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 J3KTA2 159 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 SLC3A2P08195 630 aaKnown RBP5.07□□□□□ -1.6
BRCA1-229ENST00000621897 CD63P08962 238 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 FGF2P09038 288 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 SRGAP2BP0DMP2 458 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 MMP8P22894 467 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 EEF1GP26641 437 aaKnown RBP5.07□□□□□ -1.6
BRCA1-229ENST00000621897 ME1P48163 572 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 DMWDQ09019 674 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 TWIST1Q15672 202 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 MSANTD2Q6P1R3 559 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 FAM57BQ71RH2 274 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 OR2C3Q8N628 320 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 GLMPQ8WWB7 406 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 BRI3BPQ8WY22 251 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 ZNF845Q96IR2 970 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-229ENST00000621897 TRMOQ9BU70 441 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 EIF2AQ9BY44 585 aaKnown RBP5.07□□□□□ -1.6
BRCA1-229ENST00000621897 FNIP2Q9P278 1114 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 PCDHGB2Q9Y5G2 931 aa5.07□□□□□ -1.6
BRCA1-229ENST00000621897 ANO9A1A5B4 782 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 PODXLO00592 558 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 B4GALNT1Q00973 533 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 MPEG1Q2M385 716 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 BHLHA9Q7RTU4 235 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 DPP9Q86TI2 863 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 RHPN2Q8IUC4 686 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 LAS2Q8IYD9 372 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 ASB12Q8WXK4 309 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 ZNF566Q969W8 418 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 KIAA1191Q96A73 305 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 C18orf8Q96DM3 657 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 MCRS1Q96EZ8 462 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 EIF3CQ99613 913 aaKnown RBP5.06□□□□□ -1.6
BRCA1-229ENST00000621897 NUDT22Q9BRQ3 303 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 EBF3Q9H4W6 596 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 POT1Q9NUX5 634 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 PHTF1Q9UMS5 762 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 DTNAQ9Y4J8 743 aa5.06□□□□□ -1.6
BRCA1-229ENST00000621897 A0A1W2PPC1 479 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 MYMKA6NI61 221 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 ZNF814B7Z6K7 855 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 PCDH17O14917 1159 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 NPC1O15118 1278 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 TAF5LO75529 589 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 KAT7O95251 611 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 TOMM40O96008 361 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 ITGA5P08648 1049 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 SLC8A1P32418 973 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 HSPA7P48741 367 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 SLC12A2P55011 1212 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 IL31Q6EBC2 164 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 FBXO38Q6PIJ6 1188 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 COLCA1Q6ZS62 124 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 RASGRP3Q8IV61 690 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 UEVLDQ8IX04 471 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 MMP21Q8N119 569 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 BCAS4Q8TDM0 211 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 SLC22A17Q8WUG5 538 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 NPIPB3Q92617 1050 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 GPR78Q96P69 363 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 TTLL2Q9BWV7 592 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 B3GNT3Q9Y2A9 372 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 PCDHB7Q9Y5E2 793 aa5.05□□□□□ -1.6
BRCA1-229ENST00000621897 TRBV5-3A0A0A0MS03 114 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 A0A0G2JK05 382 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 GXYLT2A0PJZ3 443 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 CD8B2A6NJW9 211 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 H3BNX3 289 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 INSIG1O15503 277 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 TLX3O43711 291 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-229ENST00000621897 UGDHO60701 494 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 TFEBP19484 476 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 NEK3P51956 506 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 HLTFQ14527 1009 aaKnown RBP eCLIP5.04□□□□□ -1.6
BRCA1-229ENST00000621897 PGM5Q15124 567 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 RAB30Q15771 203 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 IZUMO3Q5VZ72 239 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 DHRS13Q6UX07 377 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 ZNF517Q6ZMY9 492 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-229ENST00000621897 KRT27Q7Z3Y8 459 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 SAMD14Q8IZD0 417 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-229ENST00000621897 ADGRF4Q8IZF3 695 aa5.04□□□□□ -1.6
BRCA1-229ENST00000621897 ARL14EPQ8N8R7 260 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-229ENST00000621897 MPLKIPQ8TAP9 179 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms