RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ROBO1Q9Y6N7 1651 aa10.05□□□□□ -0.8
CLTCL1-211ENST00000621271 RASSF9O75901 435 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 KCNJ1P48048 391 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 FNTAP49354 379 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 PEX6Q13608 980 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 SEC23AQ15436 765 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 LONRF1Q17RB8 773 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 C11orf74Q86VG3 221 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 VSIG10LQ86VR7 867 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 TRAPPC5Q8IUR0 188 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 CLEC4FQ8N1N0 589 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 ERGIC2Q96RQ1 377 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 ECSITQ9BQ95 431 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 OXCT2Q9BYC2 517 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 EXO5Q9H790 373 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 ZSCAN32Q9NX65 697 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 SEPT3Q9UH03 358 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 GGT7Q9UJ14 662 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 KANSL1LA0AUZ9 987 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 TBC1D12O60347 775 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 NFIL3Q16649 462 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 PLEKHM3Q6ZWE6 761 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 SUGP1Q8IWZ8 645 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 MYCBPAPQ8TBZ2 947 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 GRIN3AQ8TCU5 1115 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 DNAJC1Q96KC8 554 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 THUMPD3Q9BV44 507 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 CD248Q9HCU0 757 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 ST3GAL5Q9UNP4 418 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM86B1E9PN63 330 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 LTFP02788 710 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM86B2P0C5J1 330 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 CYP2F1P24903 491 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 SOX11P35716 441 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 CRYBB1P53674 252 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 SNRPD1P62314 119 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 TOMM20Q15388 145 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 OTOP1Q7RTM1 612 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 NLRP9Q7RTR0 991 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 PTAR1Q7Z6K3 402 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 B3GALNT2Q8NCR0 500 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 ANKS1AQ92625 1134 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 DTNBP1Q96EV8 351 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 TBCBQ99426 244 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 ANKZF1Q9H8Y5 726 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 MRPS17Q9Y2R5 130 aaKnown RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 FGF19O95750 216 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 USP17L7P0C7H9 530 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 GZMAP12544 262 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 SELPP16109 830 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 PSEN1P49768 467 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 PSMC6P62333 389 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 SLC13A5Q86YT5 568 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 VPS50Q96JG6 964 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 PANX3Q96QZ0 392 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 KLF6Q99612 283 aaPredicted RBP10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 UBP1Q9NZI7 540 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 CTNNAL1Q9UBT7 734 aa10.04□□□□□ -0.8
CLTCL1-211ENST00000621271 ENO4A6NNW6 628 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ADH1CP00326 375 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 CDC25CP30307 473 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 KLK7P49862 253 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 OTUD4Q01804 1114 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 CRYMQ14894 314 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 KYNUQ16719 465 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 PAPD7Q5XG87 772 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 LRRC8BQ6P9F7 803 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 OTOP2Q7RTS6 562 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 COLGALT2Q8IYK4 626 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 MAGEC3Q8TD91 643 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 PPP1R13LQ8WUF5 828 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 CASP10Q92851 521 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 CXorf40BQ96DE9 158 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ZSWIM1Q9BR11 485 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 POPDC2Q9HBU9 364 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 NOD2Q9HC29 1040 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 GPAMQ9HCL2 828 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 HPSEQ9Y251 543 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 AKAP10O43572 662 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 SLITRK3O94933 977 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ENO1P06733 434 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 RRM1P23921 792 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 COILP38432 576 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ALDH9A1P49189 494 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 SERPINB8P50452 374 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 C16orf89Q6UX73 402 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 LRRC6Q86X45 466 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 RAB21Q9UL25 225 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 VANGL2Q9ULK5 521 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 SIGLEC1Q9BZZ2 1709 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 LTBP4Q8N2S1 1624 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 TRIM49D1C9J1S8 452 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 IL1BP01584 269 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 RBP1P09455 135 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 PAEPP09466 180 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 PTPN1P18031 435 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 ITGB6P18564 788 aa10.03□□□□□ -0.8
CLTCL1-211ENST00000621271 RANBP1P43487 201 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms