RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 EDC3Q96F86 508 aaKnown RBP5.94□□□□□ -1.46
VPS29-212ENST00000621131 HMCESQ96FZ2 354 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 MSLNLQ96KJ4 702 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 FAM83DQ9H4H8 585 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 ZNF287Q9HBT7 754 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 NKX1-2Q9UD57 310 aaPredicted RBP5.94□□□□□ -1.46
VPS29-212ENST00000621131 RIMKLBQ9ULI2 386 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 ITSN1Q15811 1721 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 ANKRD26Q9UPS8 1709 aa5.94□□□□□ -1.46
VPS29-212ENST00000621131 UTRNP46939 3433 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 ADGRB2O60241 1585 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 KIF20BQ96Q89 1820 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 AQP7P3A6NL99 342 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 GOLIM4O00461 696 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 TPP1O14773 563 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 NTN1O95631 604 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 CD19P15391 556 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 TPH1P17752 444 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 GHRHRQ02643 423 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 GRM3Q14832 879 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 C10orf25Q5T742 122 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 DCDC5Q6ZRR9 648 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 UNC13DQ70J99 1090 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 BHLHA9Q7RTU4 235 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 YAF2Q8IY57 180 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 C12orf76Q8N812 135 aaPredicted RBP5.93□□□□□ -1.46
VPS29-212ENST00000621131 C11orf44Q8N8P7 122 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 JDP2Q8WYK2 163 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 CFAP53Q96M91 514 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 SIGLEC11Q96RL6 698 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 ATP7BP35670 1465 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 ZBED9Q6R2W3 1325 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 INSRP06213 1382 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 PIK3R4Q99570 1358 aa5.93□□□□□ -1.46
VPS29-212ENST00000621131 PTCH1Q13635 1447 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 A8MVJ9 347 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 ADAM10O14672 748 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 STK3Q13188 491 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 GBX1Q14549 363 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 TMTC4Q5T4D3 741 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 TECPR1Q7Z6L1 1165 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 MRPL10Q7Z7H8 261 aaKnown RBP5.92□□□□□ -1.46
VPS29-212ENST00000621131 MORC1Q86VD1 984 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 MYO1HQ8N1T3 1032 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 ZNF668Q96K58 619 aaPredicted RBP5.92□□□□□ -1.46
VPS29-212ENST00000621131 VPS51Q9UID3 782 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 ITGB1BP2Q9UKP3 347 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 NWD1Q149M9 1564 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 METP08581 1390 aa5.92□□□□□ -1.46
VPS29-212ENST00000621131 ADAMTS13Q76LX8 1427 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 CLIC1O00299 241 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 SOCS2O14508 198 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 INMTO95050 263 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 NTSR1P30989 418 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 FOXG1P55316 489 aaPredicted RBP5.91□□□□□ -1.46
VPS29-212ENST00000621131 FAM193AP78312 1265 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 FHL3Q13643 280 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 KCNAB1Q14722 419 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 MANEALQ5VSG8 457 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 SHC4Q6S5L8 630 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 IRF2BP2Q7Z5L9 587 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 NRACQ8N912 160 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 SMCR8Q8TEV9 937 aaPredicted RBP5.91□□□□□ -1.46
VPS29-212ENST00000621131 ZDHHC12Q96GR4 267 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 HIST1H2AAQ96QV6 131 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 CDK19Q9BWU1 502 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 MTMR4Q9NYA4 1195 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 STEAP1Q9UHE8 339 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 TCEAL9Q9UHQ7 104 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 SLC27A6Q9Y2P4 619 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 TTC3P53804 2025 aa5.91□□□□□ -1.46
VPS29-212ENST00000621131 XRN1Q8IZH2 1706 aaKnown RBP5.91□□□□□ -1.46
VPS29-212ENST00000621131 CDC42BPGQ6DT37 1551 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 VSTM5A8MXK1 200 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 MGEA5O60502 916 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 MT-ND5P03915 603 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 PRF1P14222 555 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 PEX2P28328 305 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 PPP2R1AP30153 589 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 THBS4P35443 961 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 CARSP49589 748 aaKnown RBP5.9□□□□□ -1.46
VPS29-212ENST00000621131 CCT4P50991 539 aaKnown RBP5.9□□□□□ -1.46
VPS29-212ENST00000621131 PLCD1P51178 756 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 GPC5P78333 572 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 GALEQ14376 348 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 KCNB1Q14721 858 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 RBMS2Q15434 407 aaKnown RBP5.9□□□□□ -1.46
VPS29-212ENST00000621131 VSTM1Q6UX27 236 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 DEF8Q6ZN54 512 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 PIP4P1Q86T03 277 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 PNPLA1Q8N8W4 532 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 IGFBPL1Q8WX77 278 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 CUL5Q93034 780 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 HS6ST2Q96MM7 605 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 SELENOOQ9BVL4 669 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 SEMA5BQ9P283 1151 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 DNAJB11Q9UBS4 358 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 FZD4Q9ULV1 537 aa5.9□□□□□ -1.46
VPS29-212ENST00000621131 PPIP5K1Q6PFW1 1433 aa5.9□□□□□ -1.47
VPS29-212ENST00000621131 TOPAZ1Q8N9V7 1692 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms