RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 SLC26A7Q8TE54 656 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 ZDHHC16Q969W1 377 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 FAF2Q96CS3 445 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 APOPT1Q96IL0 206 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 SLITRK1Q96PX8 696 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 IL1RAPL1Q9NZN1 696 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 CXXC1Q9P0U4 656 aaPredicted RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 TXNDC16Q9P2K2 825 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 CPSF3Q9UKF6 684 aaKnown RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 DRG1Q9Y295 367 aaKnown RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 TRIM17Q9Y577 477 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 MAD1L1Q9Y6D9 718 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 KAT6AQ92794 2004 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 EVPLQ92817 2033 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 KLHL33A6NCF5 533 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 FKTNO75072 461 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 BANF1O75531 89 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 SPAG6O75602 509 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 C4BPAP04003 597 aaKnown RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 HMGCRP04035 888 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 MCF2P10911 925 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 RPS6KA3P51812 740 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 AP3M2P53677 418 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 EPHB1P54762 984 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 CUL2Q13617 745 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 SEPT6Q14141 434 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 LRRC36Q1X8D7 754 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 GRAMD1BQ3KR37 738 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 ATP13A4Q4VNC1 1196 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 EFHC2Q5JST6 749 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 SCARA5Q6ZMJ2 495 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 SDCCAG8Q86SQ7 713 aaPredicted RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 RNF180Q86T96 592 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 HIPK4Q8NE63 616 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 B4GALNT2Q8NHY0 566 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 OLIG1Q8TAK6 271 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 DENND1AQ8TEH3 1009 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 E2F7Q96AV8 911 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 NR1H4Q96RI1 486 aaPredicted RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 NFKBIZQ9BYH8 718 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 IRF2BPLQ9H1B7 796 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 PDZD7Q9H5P4 517 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 SLC17A7Q9P2U7 560 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 COQ4Q9Y3A0 265 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 PLXNA1Q9UIW2 1896 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 TSPAN1O60635 241 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 PIAS1O75925 651 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 RTN3O95197 1032 aaPredicted RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 GM2AP17900 193 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 KLRC2P26717 231 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 GSTT1P30711 240 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 EIF3EP60228 445 aaKnown RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 OTUD4Q01804 1114 aaKnown RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 TBCCQ15814 346 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 HSP90AA5PQ58FG0 334 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 C10orf62Q5T681 223 aaPredicted RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 TWF2Q6IBS0 349 aaKnown RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 WDR49Q8IV35 697 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 PCSK9Q8NBP7 692 aaKnown RBP7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 ACTL9Q8TC94 416 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 GORASP1Q9BQQ3 440 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 ACSS3Q9H6R3 686 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 WDR35Q9P2L0 1181 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 TAGLN3Q9UI15 199 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 STRIP2Q9ULQ0 834 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 PTPRJQ12913 1337 aa7.22□□□□□ -1.25
SRGAP3-213ENST00000618999 LACTBL1A8MY62 500 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 TRIM49D1C9J1S8 452 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 TBX10O75333 385 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 CST3P01034 146 aaPredicted RBP7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 SNRPAP09012 282 aaKnown RBP7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 WEE2P0C1S8 567 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 T-ENOLP0DO92 83 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 UNGP13051 313 aaPredicted RBP7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 DARSP14868 501 aaKnown RBP7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 MYL6P60660 151 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 YWHAEP62258 255 aaKnown RBP7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 CAP1Q01518 475 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 ASPHQ12797 758 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 KRT72Q14CN4 511 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 EFTUD2Q15029 972 aaKnown RBP eCLIP7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 TAF2Q6P1X5 1199 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 NOTUMQ6P988 496 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 SESTD1Q86VW0 696 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 LINC01465Q8N7H1 131 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF296Q8WUU4 475 aaPredicted RBP7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 PPP2R3CQ969Q6 453 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 CCDC124Q96CT7 223 aaKnown RBP7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 SNTG2Q9NY99 539 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 APOBEC2Q9Y235 224 aaKnown RBP7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 HES2Q9Y543 173 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 CNTNAP2Q9UHC6 1331 aa7.21□□□□□ -1.25
SRGAP3-213ENST00000618999 PFDN1O60925 122 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 FKBP6O75344 327 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 IL18RAPO95256 599 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 ITGAVP06756 1048 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 ROR1Q01973 937 aa7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 KLF1Q13351 362 aaPredicted RBP7.21□□□□□ -1.26
SRGAP3-213ENST00000618999 KRT81Q14533 505 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms