RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CCDC110Q8TBZ0 833 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 FTHL17Q9BXU8 183 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 DNAI2Q9GZS0 605 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 CAPN15O75808 1086 aa18.12■□□□□ 0.49
CNOT3-209ENST00000617930 STAT4Q14765 748 aa18.12■□□□□ 0.49
CNOT3-209ENST00000617930 NOMO2Q5JPE7 1267 aa18.12■□□□□ 0.49
CNOT3-209ENST00000617930 COLGALT2Q8IYK4 626 aa18.12■□□□□ 0.49
CNOT3-209ENST00000617930 ANKS4BQ8N8V4 417 aa18.12■□□□□ 0.49
CNOT3-209ENST00000617930 ARHGEF4Q9NR80 690 aa18.12■□□□□ 0.49
CNOT3-209ENST00000617930 TMEM161AQ9NX61 479 aa18.12■□□□□ 0.49
CNOT3-209ENST00000617930 LAMA2P24043 3122 aaKnown RBP18.12■□□□□ 0.49
CNOT3-209ENST00000617930 FNDC1Q4ZHG4 1894 aaPredicted RBP18.11■□□□□ 0.49
CNOT3-209ENST00000617930 METTL18O95568 372 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 RDXP35241 583 aaKnown RBP18.11■□□□□ 0.49
CNOT3-209ENST00000617930 PGFP49763 221 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 EFTUD2Q15029 972 aaKnown RBP eCLIP18.11■□□□□ 0.493e-6■■■■□ 23.5
CNOT3-209ENST00000617930 KCNT2Q6UVM3 1135 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.11■□□□□ 0.49
CNOT3-209ENST00000617930 EDEM1Q92611 657 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 CASD1Q96PB1 797 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 OLFM3Q96PB7 478 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 CNGB3Q9NQW8 809 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 ZBED1O96006 694 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 VAV1P15498 845 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 PCSK1P29120 753 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 GLB1LQ6UWU2 654 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 FBXO36Q8NEA4 188 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 SLC7A14Q8TBB6 771 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 SEPT8Q92599 483 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 SMARCD1Q96GM5 515 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 SUSD3Q96L08 255 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 NSRP1Q9H0G5 558 aaKnown RBP18.11■□□□□ 0.49
CNOT3-209ENST00000617930 VPS37BQ9H9H4 285 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 SLC40A1Q9NP59 571 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 RAB6BQ9NRW1 208 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 RABGEF1Q9UJ41 708 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 VWA8A3KMH1 1905 aa18.11■□□□□ 0.49
CNOT3-209ENST00000617930 TRIM43BA6NCK2 446 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 DGKIO75912 1065 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 OR4Q2P0C623 313 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 DESP17661 470 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 ARL4CP56559 192 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 DEUP1Q05D60 604 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 DCLRE1AQ6PJP8 1040 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 SCAMP5Q8TAC9 235 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 TRIM43Q96BQ3 446 aaPredicted RBP18.1■□□□□ 0.49
CNOT3-209ENST00000617930 LGMNQ99538 433 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 PRMT1Q99873 361 aaKnown RBP18.1■□□□□ 0.49
CNOT3-209ENST00000617930 C11orf49Q9H6J7 331 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 PLAC1Q9HBJ0 212 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 ETNK1Q9HBU6 452 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 SAMD15Q9P1V8 674 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 MFSD11O43934 449 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 CDH16O75309 829 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 FBXO21O94952 628 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 NCAM1P13591 858 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 ADRA1BP35368 520 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 BBS9Q3SYG4 887 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 SLC45A4Q5BKX6 768 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 PM20D1Q6GTS8 502 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 OVOS1Q6IE37 1185 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 RNF139Q8WU17 664 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 TTC25Q96NG3 672 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 ZNF317Q96PQ6 595 aaPredicted RBP18.1■□□□□ 0.49
CNOT3-209ENST00000617930 KLC4Q9NSK0 619 aa18.1■□□□□ 0.49
CNOT3-209ENST00000617930 EXOC1LA0A1B0GW35 172 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 POC1B-GALNT4F8VUJ3 575 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 LTFP02788 710 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 SEMA3BQ13214 749 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 DPYSQ14117 519 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 SPRED3Q2MJR0 410 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 LACTB2Q53H82 288 aaPredicted RBP18.09■□□□□ 0.49
CNOT3-209ENST00000617930 CEP128Q6ZU80 1094 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 TMCO2Q7Z6W1 182 aaPredicted RBP18.09■□□□□ 0.49
CNOT3-209ENST00000617930 CAND1Q86VP6 1230 aaKnown RBP18.09■□□□□ 0.49
CNOT3-209ENST00000617930 LRRC34Q8IZ02 419 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 PYROXD1Q8WU10 500 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 QKIQ96PU8 341 aaKnown RBP eCLIP18.09■□□□□ 0.49
CNOT3-209ENST00000617930 PHACTR1Q9C0D0 580 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 KDM4CQ9H3R0 1056 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 ELAC1Q9H777 363 aaKnown RBP18.09■□□□□ 0.49
CNOT3-209ENST00000617930 PAK5Q9P286 719 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 STAP1Q9ULZ2 295 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 PRG3Q9Y2Y8 225 aaPredicted RBP18.09■□□□□ 0.49
CNOT3-209ENST00000617930 SNX10Q9Y5X0 201 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 COL4A4P53420 1690 aaPredicted RBP18.09■□□□□ 0.49
CNOT3-209ENST00000617930 NLRC5Q86WI3 1866 aa18.09■□□□□ 0.49
CNOT3-209ENST00000617930 LTBP2Q14767 1821 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 TMEM120BA0PK00 339 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 CREB3O43889 395 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 VIMP08670 466 aaKnown RBP18.08■□□□□ 0.49
CNOT3-209ENST00000617930 ATP5DP30049 168 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 PBX3P40426 434 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 ELK3P41970 407 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 SCTRP47872 440 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 NR2C2P49116 596 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 RNASELQ05823 741 aaKnown RBP18.08■□□□□ 0.49
CNOT3-209ENST00000617930 XRCC4Q13426 336 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 LRRC14Q15048 493 aa18.08■□□□□ 0.49
CNOT3-209ENST00000617930 C3orf62Q6ZUJ4 267 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms