RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 PLD1Q13393 1074 aa21.27■■□□□ 1
SDHA-220ENST00000617470 MTMR3Q13615 1198 aa21.27■■□□□ 1
SDHA-220ENST00000617470 DPYSL3Q14195 570 aa21.27■■□□□ 1
SDHA-220ENST00000617470 TERF2Q15554 542 aa21.27■■□□□ 1
SDHA-220ENST00000617470 GPR153Q6NV75 609 aa21.27■■□□□ 1
SDHA-220ENST00000617470 DENND5BQ6ZUT9 1274 aa21.27■■□□□ 1
SDHA-220ENST00000617470 NUP93Q8N1F7 819 aa21.27■■□□□ 1
SDHA-220ENST00000617470 SCAMP5Q8TAC9 235 aa21.27■■□□□ 1
SDHA-220ENST00000617470 CDX2Q99626 313 aaPredicted RBP21.27■■□□□ 1
SDHA-220ENST00000617470 DDX23Q9BUQ8 820 aaKnown RBP21.27■■□□□ 1
SDHA-220ENST00000617470 CALCOCO1Q9P1Z2 691 aa21.27■■□□□ 1
SDHA-220ENST00000617470 DRG1Q9Y295 367 aaKnown RBP21.27■■□□□ 1
SDHA-220ENST00000617470 CCL16O15467 120 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 LINC01565O15544 149 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 IL4RP24394 825 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 TKTL1P51854 596 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 ATXN1P54253 815 aaKnown RBP21.27■□□□□ 0.99
SDHA-220ENST00000617470 TTMPQ5BVD1 217 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 ELMOD1Q8N336 334 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 ALLCQ8N6M5 410 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 OR2W6PQ8NHA6 318 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 ACTL9Q8TC94 416 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 CASP10Q92851 521 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 SNF8Q96H20 258 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 SPATA17Q96L03 361 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 FAM129AQ9BZQ8 928 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 PNPLA8Q9NP80 782 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 GPATCH2LQ9NWQ4 482 aa21.27■□□□□ 0.99
SDHA-220ENST00000617470 SLC38A8A6NNN8 435 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 ITIH2P19823 946 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 VPS41P49754 854 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 CDH6P55285 790 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 OTUD4Q01804 1114 aaKnown RBP21.26■□□□□ 0.99
SDHA-220ENST00000617470 CA9Q16790 459 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 ZC3H12AQ5D1E8 599 aaKnown RBP21.26■□□□□ 0.99
SDHA-220ENST00000617470 UBAP2Q5T6F2 1119 aaKnown RBP21.26■□□□□ 0.99
SDHA-220ENST00000617470 SCYL2Q6P3W7 929 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 LRIG3Q6UXM1 1119 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 EFHBQ8N7U6 833 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 UBLCP1Q8WVY7 318 aaPredicted RBP21.26■□□□□ 0.99
SDHA-220ENST00000617470 TEKT4Q8WW24 435 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 SNRNP25Q9BV90 132 aaKnown RBP21.26■□□□□ 0.99
SDHA-220ENST00000617470 CALN1Q9BXU9 219 aa21.26■□□□□ 0.99
SDHA-220ENST00000617470 OPA1O60313 960 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 ITGAVP06756 1048 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 SRGAP2BP0DMP2 458 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 POU3F3P20264 500 aaPredicted RBP21.25■□□□□ 0.99
SDHA-220ENST00000617470 MRPS5P82675 430 aaKnown RBP21.25■□□□□ 0.99
SDHA-220ENST00000617470 BOLA3Q53S33 107 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 EFHC1Q5JVL4 640 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 C12orf76Q8N812 135 aaPredicted RBP21.25■□□□□ 0.99
SDHA-220ENST00000617470 ADAM21Q9UKJ8 722 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 ZNF148Q9UQR1 794 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 TNFRSF10BO14763 440 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 ZSCAN5DPP0CG00 497 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 ETS1P14921 441 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 PECAM1P16284 738 aaPredicted RBP21.25■□□□□ 0.99
SDHA-220ENST00000617470 ADCY8P40145 1251 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 ITGA8P53708 1063 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 USP46P62068 366 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 CALCOCO2Q13137 446 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 SPDYCQ5MJ68 293 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 OTUD1Q5VV17 481 aaPredicted RBP21.25■□□□□ 0.99
SDHA-220ENST00000617470 RFX6Q8HWS3 928 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 ZNF512Q96ME7 567 aaPredicted RBP21.25■□□□□ 0.99
SDHA-220ENST00000617470 RUFY1Q96T51 708 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 TBCBQ99426 244 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 LRRC4CQ9HCJ2 640 aa21.25■□□□□ 0.99
SDHA-220ENST00000617470 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.25■□□□□ 0.99
SDHA-220ENST00000617470 MTRF1LQ9UGC7 380 aaKnown RBP21.25■□□□□ 0.99
SDHA-220ENST00000617470 CCDC195A0A1B0GUA6 201 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 GLP2RO95838 553 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 USP17L7P0C7H9 530 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 CSH1P0DML2 217 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 CSH2P0DML3 217 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 MATKP42679 507 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 PMS2P54278 862 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 LMNB2Q03252 620 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 ZNF844Q08AG5 666 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 KCNC3Q14003 757 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 CCDC85BQ15834 202 aaPredicted RBP21.24■□□□□ 0.99
SDHA-220ENST00000617470 RAB41Q5JT25 222 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 GSTA5Q7RTV2 222 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 ITIH5Q86UX2 942 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 DEFB106AQ8N104 65 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 CCDC89Q8N998 374 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 TMEM121Q9BTD3 319 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 APOL5Q9BWW9 433 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 MAGEB5Q9BZ81 275 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 ULBP1Q9BZM6 244 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 C10orf88Q9H8K7 445 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 FAM204AQ9H8W3 233 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 PCDH18Q9HCL0 1135 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 CLDND1Q9NY35 253 aa21.24■□□□□ 0.99
SDHA-220ENST00000617470 MDM4O15151 490 aa21.23■□□□□ 0.99
SDHA-220ENST00000617470 RTN3O95197 1032 aaPredicted RBP21.23■□□□□ 0.99
SDHA-220ENST00000617470 FOSL2P15408 326 aa21.23■□□□□ 0.99
SDHA-220ENST00000617470 YWHAQP27348 245 aa21.23■□□□□ 0.99
SDHA-220ENST00000617470 CHKAP35790 457 aa21.23■□□□□ 0.99
SDHA-220ENST00000617470 PITX1P78337 314 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms