RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 MSLNLQ96KJ4 702 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 ZNF558Q96NG5 402 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 GAD1Q99259 594 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 KCNJ15Q99712 375 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 PAAF1Q9BRP4 392 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 POLR3CQ9BUI4 534 aaPredicted RBP5.04□□□□□ -1.6
CUL3-216ENST00000617432 CCDC113Q9H0I3 377 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 BHMT2Q9H2M3 363 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 PDZD7Q9H5P4 517 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 TUFT1Q9NNX1 390 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 ANKEF1Q9NU02 776 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 COG5Q9UP83 839 aa5.04□□□□□ -1.6
CUL3-216ENST00000617432 PRG3Q9Y2Y8 225 aaPredicted RBP5.04□□□□□ -1.6
CUL3-216ENST00000617432 C5orf42Q9H799 3197 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 BRWD1Q9NSI6 2320 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 VPS37CA5D8V6 355 aaPredicted RBP5.03□□□□□ -1.6
CUL3-216ENST00000617432 ARHGEF35A5YM69 484 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 VWA3AA6NCI4 1184 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 DKC1O60832 514 aaKnown RBP eCLIP5.03□□□□□ -1.6
CUL3-216ENST00000617432 ERLIN2O94905 339 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 GALTP07902 379 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 EPCAMP16422 314 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 CYP11B2P19099 503 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 RPA1P27694 616 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 NDUFV1P49821 464 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 ATP2C1P98194 919 aaPredicted RBP5.03□□□□□ -1.6
CUL3-216ENST00000617432 RESTQ13127 1097 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 ADAM15Q13444 863 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 CUL4AQ13619 759 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 KCNC3Q14003 757 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 DUSP6Q16828 381 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 NOMO2Q5JPE7 1267 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 ODR4Q5SWX8 454 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 CDCA2Q69YH5 1023 aaPredicted RBP5.03□□□□□ -1.6
CUL3-216ENST00000617432 USP49Q70CQ1 688 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 USP53Q70EK8 1073 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 OTUD6AQ7L8S5 288 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 SRGAP1Q7Z6B7 1085 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.03□□□□□ -1.6
CUL3-216ENST00000617432 MRPL10Q7Z7H8 261 aaKnown RBP5.03□□□□□ -1.6
CUL3-216ENST00000617432 C12orf76Q8N812 135 aaPredicted RBP5.03□□□□□ -1.6
CUL3-216ENST00000617432 IGSF22Q8N9C0 903 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 GSTCDQ8NEC7 633 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 HASPINQ8TF76 798 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 TCP11Q8WWU5 503 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 CCDC43Q96MW1 224 aaKnown RBP5.03□□□□□ -1.6
CUL3-216ENST00000617432 LMAN2LQ9H0V9 348 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 ZBP1Q9H171 429 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 SMOC2Q9H3U7 446 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 TLE6Q9H808 572 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 RSAD1Q9HA92 442 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 ENTPD7Q9NQZ7 604 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 SNTG2Q9NY99 539 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 DACT1Q9NYF0 836 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 LRWD1Q9UFC0 647 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 NOL7Q9UMY1 257 aaKnown RBP5.03□□□□□ -1.6
CUL3-216ENST00000617432 SMC3Q9UQE7 1217 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 CLIC4Q9Y696 253 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 PLXNA3P51805 1871 aa5.03□□□□□ -1.6
CUL3-216ENST00000617432 ARL5CA6NH57 179 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 CASTOR2A6NHX0 329 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 H3BQV1 296 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 PTGESO14684 152 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 NRP1O14786 923 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 CLASP2O75122 1294 aaKnown RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 HIP1RO75146 1068 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 PRKCBP05771 671 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 NCLP19338 710 aaKnown RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 VAMP1P23763 118 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 GRIA2P42262 883 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 TRAPPC10P48553 1259 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 PEX3P56589 373 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 CEBPZQ03701 1054 aaKnown RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 RNASELQ05823 741 aaKnown RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 MAP4K2Q12851 820 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 PKP1Q13835 747 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 DHX8Q14562 1220 aaKnown RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 SF3A1Q15459 793 aaKnown RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 FXNQ16595 210 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 TMEM119Q4V9L6 283 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 GLRA4Q5JXX5 417 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 RINT1Q6NUQ1 792 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 COLGALT2Q8IYK4 626 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 VPS52Q8N1B4 723 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 EFHBQ8N7U6 833 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 ST13P5Q8NFI4 369 aaPredicted RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 UHMK1Q8TAS1 419 aaKnown RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 IGSF21Q96ID5 467 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 ZBTB45Q96K62 511 aaPredicted RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 JPH2Q9BR39 696 aaPredicted RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 IER2Q9BTL4 223 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 HAPLN2Q9GZV7 340 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 ACBD3Q9H3P7 528 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 FZD8Q9H461 694 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 UPF2Q9HAU5 1272 aaKnown RBP5.02□□□□□ -1.61
CUL3-216ENST00000617432 CHST12Q9NRB3 414 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 SPG21Q9NZD8 308 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 CNTNAP2Q9UHC6 1331 aa5.02□□□□□ -1.61
CUL3-216ENST00000617432 MUTYHQ9UIF7 546 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms