RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TCF12Q99081 682 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF556Q9HAH1 456 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 IMPAD1Q9NX62 359 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PRG3Q9Y2Y8 225 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 RP1L1Q8IWN7 2480 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 DENRO43583 198 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 LARGE1O95461 756 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 NR3C2P08235 984 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ABHD2P08910 425 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 S100A2P29034 98 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CASP4P49662 377 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 NME5P56597 212 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 HERVK_113P62684 666 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SPIRE1Q08AE8 756 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PTK7Q13308 1070 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 USP44Q9H0E7 712 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 C1orf112Q9NSG2 853 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 AP3M1Q9Y2T2 418 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 MED23Q9ULK4 1368 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 FUOMA2VDF0 154 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 MAGEB3O15480 346 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SLC9A1P19634 815 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CD79BP40259 229 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 POLA2Q14181 598 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PPP1R3GB7ZBB8 358 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 HADHAP40939 763 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 MAGEA2P43356 314 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 HK2P52789 917 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 NFE2Q16621 373 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 KYAT3Q6YP21 454 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 KRT77Q7Z794 578 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CDAN1Q8IWY9 1227 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 METTL6Q8TCB7 284 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 MCOLN3Q8TDD5 553 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 TRUB1Q8WWH5 349 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SSX3Q99909 188 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 MED28Q9H204 178 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 COPS7BQ9H9Q2 264 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ITGA11Q9UKX5 1188 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PIPSLA2A3N6 862 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PRSS44E7EML9 344 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ASNSP08243 561 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 GPSM2P81274 684 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 MEA1Q16626 185 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 C2CD6Q53TS8 623 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ARMC6Q6NXE6 501 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 EBF3Q9H4W6 596 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CHKBQ9Y259 395 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CPS1P31327 1500 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SERPINE1P05121 402 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 STAT5AP42229 794 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 STAT5BP51692 787 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 STX4Q12846 297 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PAGE2BQ5JRK9 111 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 UBE2TQ9NPD8 197 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ACSL5Q9ULC5 683 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ADGRB3O60242 1522 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PXDNLA1KZ92 1463 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 I3L521 148 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SESN2P58004 480 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 GSTM4Q03013 218 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 NCF4Q15080 339 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF181Q2M3W8 571 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SULT1C3Q6IMI6 304 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 TIGD7Q6NT04 549 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 BHLHB9Q6PI77 547 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 EFL1Q7Z2Z2 1120 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 GALNT12Q8IXK2 581 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 TLCD1Q96CP7 247 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 KCND2Q9NZV8 630 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 RGSL1A5PLK6 1076 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ITM2AO43736 263 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 GNAZP19086 355 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SAT1P21673 171 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 TMBIM6P55061 237 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 RFX6Q8HWS3 928 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF557Q8N988 423 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 NDUFAF4Q9P032 175 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 NUDT5Q9UKK9 219 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CAPN6Q9Y6Q1 641 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ADAMTS13Q76LX8 1427 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PKLRP30613 574 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SFNP31947 248 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 OVGP1Q12889 678 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 TIGD2Q4W5G0 525 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 P3H2Q8IVL5 708 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 KRT78Q8N1N4 520 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ZSCAN18Q8TBC5 510 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ZSCAN10Q96SZ4 725 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CCNB1IP1Q9NPC3 277 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 H3BMM5 538 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 H3BSA7 217 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 AMIGO2Q86SJ2 522 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ENOPH1Q9UHY7 261 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 RGPD2P0DJD1 1756 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 A0A1B0GVG6 124 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 WASLO00401 505 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 GPAA1O43292 621 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 RFPL2O75678 378 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms