RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 KRT7P08729 469 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 CTNNA2P26232 953 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 IL1R2P27930 398 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 CCR1P32246 355 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 CTNNA1P35221 906 aaKnown RBP13.32□□□□□ -0.28
PRKN-210ENST00000612540 AVPR1AP37288 418 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 MTHFRP42898 656 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 CXCR3P49682 368 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 KPNA1P52294 538 aaPredicted RBP13.32□□□□□ -0.28
PRKN-210ENST00000612540 SLC25A11Q02978 314 aaKnown RBP13.32□□□□□ -0.28
PRKN-210ENST00000612540 NNTQ13423 1086 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 EFHC2Q5JST6 749 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 KCNT1Q5JUK3 1230 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 KLHDC10Q6PID8 442 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 ZNF276Q8N554 614 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 CCDC185Q8N715 623 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 SNRNP25Q9BV90 132 aaKnown RBP13.32□□□□□ -0.28
PRKN-210ENST00000612540 SLC46A2Q9BY10 475 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 RNF38Q9H0F5 515 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 SMG9Q9H0W8 520 aaKnown RBP13.32□□□□□ -0.28
PRKN-210ENST00000612540 WDCPQ9H6R7 721 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 WDR6Q9NNW5 1121 aaKnown RBP13.32□□□□□ -0.28
PRKN-210ENST00000612540 CD207Q9UJ71 328 aa13.32□□□□□ -0.28
PRKN-210ENST00000612540 LRRD1A4D1F6 860 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 KCNK3O14649 394 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 DCXO43602 365 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 PAPLNO95428 1278 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 TUBB4AP04350 444 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 SLC2A3P11169 496 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 PFKLP17858 780 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 HOXD11P31277 338 aaPredicted RBP13.31□□□□□ -0.28
PRKN-210ENST00000612540 RWDD2BP57060 319 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 COG7P83436 770 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 SMAD4Q13485 552 aaKnown RBP13.31□□□□□ -0.28
PRKN-210ENST00000612540 KRT81Q14533 505 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 PPP2R5DQ14738 602 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 BRMS1LQ5PSV4 323 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 LRRC38Q5VT99 294 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 NUGGCQ68CJ6 796 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 TXNRD3NBQ6F5E7 133 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 BNIPLQ7Z465 357 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 CCDC50Q8IVM0 306 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 ATP6V0D2Q8N8Y2 350 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 CD101Q93033 1021 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 PLD4Q96BZ4 506 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 HES6Q96HZ4 224 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 MSLNLQ96KJ4 702 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 FCRL2Q96LA5 508 aaPredicted RBP13.31□□□□□ -0.28
PRKN-210ENST00000612540 KLF16Q9BXK1 252 aaPredicted RBP13.31□□□□□ -0.28
PRKN-210ENST00000612540 TLR10Q9BXR5 811 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 TKTL2Q9H0I9 626 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 DHX35Q9H5Z1 703 aaKnown RBP13.31□□□□□ -0.28
PRKN-210ENST00000612540 TMPRSS4Q9NRS4 437 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 GKN1Q9NS71 199 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKN-210ENST00000612540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKN-210ENST00000612540 DDX56Q9NY93 547 aaKnown RBP13.31□□□□□ -0.28
PRKN-210ENST00000612540 SLC12A6Q9UHW9 1150 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 ZMYM5Q9UJ78 669 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 AP4E1Q9UPM8 1137 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 DENND4AQ7Z401 1863 aa13.31□□□□□ -0.28
PRKN-210ENST00000612540 SCAMP3O14828 347 aaKnown RBP13.3□□□□□ -0.28
PRKN-210ENST00000612540 DDX3YO15523 660 aaKnown RBP13.3□□□□□ -0.28
PRKN-210ENST00000612540 OLFM2O95897 454 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 RARAP10276 462 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 GBP2P32456 591 aaPredicted RBP13.3□□□□□ -0.28
PRKN-210ENST00000612540 ADRA1BP35368 520 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 GGCXP38435 758 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 HARS2P49590 506 aaKnown RBP13.3□□□□□ -0.28
PRKN-210ENST00000612540 CDH6P55285 790 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 SLC7A9P82251 487 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 RING1Q06587 406 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 CBX2Q14781 532 aaPredicted RBP13.3□□□□□ -0.28
PRKN-210ENST00000612540 ATP13A4Q4VNC1 1196 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 BOLA3Q53S33 107 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 PPP6R3Q5H9R7 873 aaPredicted RBP13.3□□□□□ -0.28
PRKN-210ENST00000612540 ERMARDQ5T6L9 678 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 SEL1L2Q5TEA6 688 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 POLNQ7Z5Q5 900 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 UNC45BQ8IWX7 931 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 NPAS3Q8IXF0 933 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 CMTM8Q8IZV2 173 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 KCTD6Q8NC69 237 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 TEKT4Q8WW24 435 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 ALG3Q92685 438 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 NTAN1Q96AB6 310 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 SIK2Q9H0K1 926 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 S1PR5Q9H228 398 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 TMEM51Q9NW97 253 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 CFAP97Q9P2B7 532 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 LSM7Q9UK45 103 aaKnown RBP13.3□□□□□ -0.28
PRKN-210ENST00000612540 FZD10Q9ULW2 581 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 SH3BP1Q9Y3L3 701 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 USP15Q9Y4E8 981 aaPredicted RBP13.3□□□□□ -0.28
PRKN-210ENST00000612540 PCDHA3Q9Y5H8 950 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 TRIOO75962 3097 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 MUC6Q6W4X9 2439 aa13.3□□□□□ -0.28
PRKN-210ENST00000612540 KMT2EQ8IZD2 1858 aa13.29□□□□□ -0.28
PRKN-210ENST00000612540 ZNF318Q5VUA4 2279 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms