RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SNX16P57768 344 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 XKR4Q5GH76 650 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 FBXO47Q5MNV8 452 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 PPP1R26Q5T8A7 1209 aaPredicted RBP15.2■□□□□ 0.02
CDH1-213ENST00000612417 ZNF449Q6P9G9 518 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 MTDHQ86UE4 582 aaKnown RBP15.2■□□□□ 0.02
CDH1-213ENST00000612417 CAND1Q86VP6 1230 aaKnown RBP15.2■□□□□ 0.02
CDH1-213ENST00000612417 TTC30AQ86WT1 665 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 RNF169Q8NCN4 708 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 FAM13CQ8NE31 585 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 SLC35F5Q8WV83 523 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 MRPL45Q9BRJ2 306 aaKnown RBP15.2■□□□□ 0.02
CDH1-213ENST00000612417 TUBB6Q9BUF5 446 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 TRPV6Q9H1D0 765 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 NGRNQ9NPE2 291 aaKnown RBP15.2■□□□□ 0.02
CDH1-213ENST00000612417 STARD7Q9NQZ5 370 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 ETNK2Q9NVF9 386 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 NUMBLQ9Y6R0 609 aa15.2■□□□□ 0.02
CDH1-213ENST00000612417 A0A1W2PQ45 241 aaPredicted RBP15.19■□□□□ 0.02
CDH1-213ENST00000612417 A0A1W2PQY0 241 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 E7ENQ6 273 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 PIK3R2O00459 728 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 KRT37O76014 449 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 PYGBP11216 843 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 CCNFP41002 786 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 WASHC2DQ5SRD0 308 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 ZNF618Q5T7W0 954 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 PRPF39Q86UA1 669 aaKnown RBP15.19■□□□□ 0.02
CDH1-213ENST00000612417 MAB21L3Q8N8X9 362 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 LPPQ93052 612 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 SKA1Q96BD8 255 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 ZNF560Q96MR9 790 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 FAM111AQ96PZ2 611 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 BEGAINQ9BUH8 593 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 RNPEPL1Q9HAU8 725 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 KCNK13Q9HB14 408 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 PLAC1Q9HBJ0 212 aa15.19■□□□□ 0.02
CDH1-213ENST00000612417 ZC3H7BQ9UGR2 993 aaKnown RBP15.19■□□□□ 0.02
CDH1-213ENST00000612417 MTO1Q9Y2Z2 717 aaKnown RBP15.19■□□□□ 0.02
CDH1-213ENST00000612417 MEIS3P2A8K0S8 358 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 PIRO00625 290 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 SNRPAP09012 282 aaKnown RBP15.18■□□□□ 0.02
CDH1-213ENST00000612417 DLDP09622 509 aaKnown RBP15.18■□□□□ 0.02
CDH1-213ENST00000612417 PTPN9P43378 593 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 SERPINB4P48594 390 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 RGS7P49802 495 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 HDAC4P56524 1084 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 SOX4Q06945 474 aaPredicted RBP15.18■□□□□ 0.02
CDH1-213ENST00000612417 LPIN1Q14693 890 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 DPYSL2Q16555 572 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 ARCQ7LC44 396 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 CDKL3Q8IVW4 592 aaPredicted RBP15.18■□□□□ 0.02
CDH1-213ENST00000612417 GPATCH11Q8N954 259 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 CFAP36Q96G28 342 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 GAD1Q99259 594 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 C11orf84Q9BUA3 381 aaPredicted RBP15.18■□□□□ 0.02
CDH1-213ENST00000612417 NRDE2Q9H7Z3 1164 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 GPATCH2LQ9NWQ4 482 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 DCTN4Q9UJW0 460 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 HEY1Q9Y5J3 304 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 KPNA7A9QM74 516 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 TRIM49D1C9J1S8 452 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 PAPSS1O43252 624 aaPredicted RBP15.18■□□□□ 0.02
CDH1-213ENST00000612417 DIAPH2O60879 1101 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 PEX11AO75192 247 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 GCATO75600 419 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 TPSB2P20231 275 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 EPHB2P29323 1055 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 SCNN1AP37088 669 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 MLH1P40692 756 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 PNPLA4P41247 253 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 CDK16Q00536 496 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 OVGP1Q12889 678 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 TPSAB1Q15661 275 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 CA9Q16790 459 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 LGSNQ5TDP6 509 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 FAM91A1Q658Y4 838 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 ARHGAP17Q68EM7 881 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 SCYL2Q6P3W7 929 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 LONP2Q86WA8 852 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 ENDOVQ8N8Q3 282 aaKnown RBP15.18■□□□□ 0.02
CDH1-213ENST00000612417 OR6B3Q8NGW1 331 aa15.18■□□□□ 0.02
CDH1-213ENST00000612417 SRPK1Q96SB4 655 aaKnown RBP15.18■□□□□ 0.02
CDH1-213ENST00000612417 COPEO14579 308 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 PTGESO14684 152 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 HAUS5O94927 633 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 APOEP02649 317 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 APRTP07741 180 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 ZFXP17010 805 aaPredicted RBP15.17■□□□□ 0.02
CDH1-213ENST00000612417 CALB2P22676 271 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 NR2C2P49116 596 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 TAF6P49848 677 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 ARFIP2P53365 341 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 TRIM71Q2Q1W2 868 aaKnown RBP15.17■□□□□ 0.02
CDH1-213ENST00000612417 ACOT1Q86TX2 421 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 UNC93AQ86WB7 457 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 PPM1NQ8N819 430 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 CFAP61Q8NHU2 1237 aa15.17■□□□□ 0.02
CDH1-213ENST00000612417 CENPIQ92674 756 aaPredicted RBP15.17■□□□□ 0.02
CDH1-213ENST00000612417 MTBPQ96DY7 904 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms