RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 TATDN2Q93075 761 aa13.97□□□□□ -0.17
HMGB1P24-201ENST00000611897 IPO9Q96P70 1041 aaKnown RBP13.97□□□□□ -0.17
HMGB1P24-201ENST00000611897 GAREM1Q9H706 876 aa13.97□□□□□ -0.17
HMGB1P24-201ENST00000611897 HESX1Q9UBX0 185 aa13.97□□□□□ -0.17
HMGB1P24-201ENST00000611897 APC2O95996 2303 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 TMEM131Q92545 1883 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 BCAT2O15382 392 aaPredicted RBP13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 MSI1O43347 362 aaKnown RBP13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 GJB3O75712 270 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 ZBED1O96006 694 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 MATKP42679 507 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 BCAT1P54687 386 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 RING1Q06587 406 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 PDE4CQ08493 712 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 LRMPQ12912 555 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 COL9A2Q14055 689 aaPredicted RBP13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 HNRNPDQ14103 355 aaKnown RBP13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 CCDC157Q569K6 752 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 KRBA2Q6ZNG9 492 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 RAB44Q7Z6P3 723 aaPredicted RBP13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 FMNL3Q8IVF7 1028 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 SIX6OS1Q8N1H7 587 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 PLD4Q96BZ4 506 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 PIWIL1Q96J94 861 aaKnown RBP13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 GOLPH3LQ9H4A5 285 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 ITM2CQ9NQX7 267 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 RAB20Q9NX57 234 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 SFMBT1Q9UHJ3 866 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 TSPAN16Q9UKR8 245 aa13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 FNDC3AQ9Y2H6 1198 aaKnown RBP13.96□□□□□ -0.17
HMGB1P24-201ENST00000611897 FASNP49327 2511 aaKnown RBP13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 A0A1B0GVT2 93 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 PIK3R2O00459 728 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 NPC1O15118 1278 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 CETN3O15182 167 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 CER1O95813 267 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 OXTRP30559 389 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 HARS2P49590 506 aaKnown RBP13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 COPAP53621 1224 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 SCAPQ12770 1279 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 SLC14A1Q13336 389 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 EIF4HQ15056 248 aaKnown RBP13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 NFIL3Q16649 462 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 MPPE1Q53F39 396 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 SGO2Q562F6 1265 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 TMEM215Q68D42 235 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 ARHGAP17Q68EM7 881 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 C19orf48Q6RUI8 117 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 LAYNQ6UX15 382 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 CHST9Q7L1S5 443 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 CPXM2Q8N436 756 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 TTC39CQ8N584 583 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 ANKRD52Q8NB46 1076 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 UBA3Q8TBC4 463 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 NUP58Q9BVL2 599 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 ZDHHC5Q9C0B5 715 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 LHX5Q9H2C1 402 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 TM7SF3Q9NS93 570 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 ABCB8Q9NUT2 735 aa13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 APOBEC2Q9Y235 224 aaKnown RBP13.95□□□□□ -0.18
HMGB1P24-201ENST00000611897 TP53BP1Q12888 1972 aaPredicted RBP13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 METTL12A8MUP2 240 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 STX10O60499 249 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 LCP1P13796 627 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 HOXD9P28356 352 aaPredicted RBP13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 GTF2H1P32780 548 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 CSNK1EP49674 416 aaKnown RBP13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 RGS7P49802 495 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 BST2Q10589 180 aaKnown RBP13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 E2F5Q15329 346 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 CBWD6Q4V339 395 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 RAB41Q5JT25 222 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 CBWD3Q5JTY5 395 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 CBWD5Q5RIA9 395 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 METTL3Q86U44 580 aaKnown RBP13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 ZNF276Q8N554 614 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 CADM4Q8NFZ8 388 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 OR2T3Q8NH03 318 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 GANCQ8TET4 914 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 DNASE2BQ8WZ79 361 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 SLC2A11Q9BYW1 496 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 C6orf106Q9H6K1 298 aaPredicted RBP13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 OLA1Q9NTK5 396 aaKnown RBP13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 SLCO1B1Q9Y6L6 691 aa13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 MUC22E2RYF6 1773 aaPredicted RBP13.94□□□□□ -0.18
HMGB1P24-201ENST00000611897 PTPRBP23467 1997 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 YJEFN3A6XGL0 299 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 E7ENQ6 273 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 XPO1O14980 1071 aaKnown RBP13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 FSBPO95073 299 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 ZNF202O95125 648 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 PABPC1P11940 636 aaKnown RBP13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 HLA-FP30511 346 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 ACSL1P33121 698 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 SGSHP51688 502 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 ZNF132P52740 706 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 BNC1Q01954 994 aa13.93□□□□□ -0.18
HMGB1P24-201ENST00000611897 PNOCQ13519 176 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms