RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CYTH4Q9UIA0 394 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 DNMT3LQ9UJW3 386 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 NOCTQ9UK39 431 aaKnown RBP9.2□□□□□ -0.94
SMAD4-217ENST00000611848 FBXL21Q9UKT6 434 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 MYOFQ9NZM1 2061 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 TICRRQ7Z2Z1 1910 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 TRIOO75962 3097 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 YJEFN3A6XGL0 299 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 E5RJQ4 531 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 E7ENQ6 273 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 PIK3R2O00459 728 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 KCNK3O14649 394 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 BUB1BO60566 1050 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-217ENST00000611848 GPR37L1O60883 481 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 TBX18O95935 607 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 LTFP02788 710 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 GZMAP12544 262 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 CHRNB2P17787 502 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 MLLT6P55198 1093 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-217ENST00000611848 ZXDBP98169 803 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 FMO1Q01740 532 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 SLC44A4Q53GD3 710 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 C10orf120Q5SQS8 335 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 BSPRYQ5W0U4 402 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 C8orf74Q6P047 294 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 BEND5Q7L4P6 421 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 PEX26Q7Z412 305 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 SCUBE3Q8IX30 993 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 RHOT2Q8IXI1 618 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 CSGALNACT1Q8TDX6 532 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 RNF139Q8WU17 664 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 SLC20A1Q8WUM9 679 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 OSCP1Q8WVF1 389 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 NDRG1Q92597 394 aaKnown RBP9.2□□□□□ -0.94
SMAD4-217ENST00000611848 ARHGEF26Q96DR7 871 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 SHDQ96IW2 340 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 ZFRQ96KR1 1074 aaKnown RBP9.2□□□□□ -0.94
SMAD4-217ENST00000611848 CPXM1Q96SM3 734 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 FAM83CQ9BQN1 747 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 TRIM62Q9BVG3 475 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 SELENOOQ9BVL4 669 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 GOLPH3Q9H4A6 298 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 MED4Q9NPJ6 270 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 SMPD4Q9NXE4 827 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 TAS2R14Q9NYV8 317 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 STRIP2Q9ULQ0 834 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 TTC7AQ9ULT0 858 aaPredicted RBP9.2□□□□□ -0.94
SMAD4-217ENST00000611848 HPCAL4Q9UM19 191 aa9.2□□□□□ -0.94
SMAD4-217ENST00000611848 TMEM221A6NGB7 291 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 BHMG1C9JSJ3 638 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-217ENST00000611848 M0R296 226 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 ARNTLO00327 626 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 SLC9A3R1O14745 358 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-217ENST00000611848 PAPSS1O43252 624 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-217ENST00000611848 RTN2O75298 545 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 MTA2O94776 668 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 CYP1A1P04798 512 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-217ENST00000611848 GLI1P08151 1106 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 GLULP15104 373 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 IFNAR2P48551 515 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 NOMO3P69849 1222 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 COG7P83436 770 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 PRKCQQ04759 706 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 NNTQ13423 1086 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 PDGFRLQ15198 375 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 PTPN20Q4JDL3 420 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 EMBQ6PCB8 327 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 BMP8AQ7Z5Y6 402 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 DAAM2Q86T65 1068 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 ERICH1Q86X53 443 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 ZDHHC17Q8IUH5 632 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 IFT20Q8IY31 132 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 RIN3Q8TB24 985 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 CLEC4CQ8WTT0 213 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 CAVIN3Q969G5 261 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 FAM149B1Q96BN6 582 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 OTUB2Q96DC9 234 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 ASIC4Q96FT7 647 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 MSANTD3Q96H12 275 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 PCDHB18PQ96TA0 734 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 KLF16Q9BXK1 252 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-217ENST00000611848 THAP2Q9H0W7 228 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 SYNCQ9H7C4 482 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 OSGEPQ9NPF4 335 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 ARHGEF3Q9NR81 526 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 GKN1Q9NS71 199 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 ASNSD1Q9NWL6 643 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 DUS2Q9NX74 493 aaKnown RBP9.19□□□□□ -0.94
SMAD4-217ENST00000611848 MARCH2Q9P0N8 246 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 CFAP97Q9P2B7 532 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 TBC1D14Q9P2M4 693 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 RASAL2Q9UJF2 1139 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 NUDT5Q9UKK9 219 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 AMFRQ9UKV5 643 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 SH3BP1Q9Y3L3 701 aa9.19□□□□□ -0.94
SMAD4-217ENST00000611848 E2F8A0AVK6 867 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 TMCO5BA8MYB1 307 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 PGRMC1O00264 195 aaKnown RBP9.18□□□□□ -0.94
SMAD4-217ENST00000611848 MDM4O15151 490 aa9.18□□□□□ -0.94
SMAD4-217ENST00000611848 POLR3GO15318 223 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms