RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 FAM200BP0CF97 657 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 NEFHP12036 1026 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 PAX3P23760 479 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 CCND1P24385 295 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 TKTP29401 623 aaKnown RBP10.77□□□□□ -0.68
PABPC1-224ENST00000610907 RGS2P41220 211 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 SERPINB4P48594 390 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 ATXN1P54253 815 aaKnown RBP10.77□□□□□ -0.68
PABPC1-224ENST00000610907 ADIGQ0VDE8 80 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 SCAPQ12770 1279 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 MTM1Q13496 603 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 NBPF20Q3BBV1 942 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 DCAF6Q58WW2 860 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 INTS6LQ5JSJ4 861 aaKnown RBP10.77□□□□□ -0.68
PABPC1-224ENST00000610907 ZNF618Q5T7W0 954 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 FAXCQ5TGI0 409 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 ATG16L1Q676U5 607 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 TWF2Q6IBS0 349 aaKnown RBP10.77□□□□□ -0.68
PABPC1-224ENST00000610907 PAQR9Q6ZVX9 377 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 CCDC91Q7Z6B0 441 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 ACMSDQ8TDX5 336 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 RNF139Q8WU17 664 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 FAM149B1Q96BN6 582 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 STAMBPL1Q96FJ0 436 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 PGAP3Q96FM1 320 aaPredicted RBP10.77□□□□□ -0.68
PABPC1-224ENST00000610907 FAM111AQ96PZ2 611 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 SRPK1Q96SB4 655 aaKnown RBP10.77□□□□□ -0.68
PABPC1-224ENST00000610907 KLF6Q99612 283 aaPredicted RBP10.77□□□□□ -0.68
PABPC1-224ENST00000610907 CD248Q9HCU0 757 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 CNGB3Q9NQW8 809 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 CPA4Q9UI42 421 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 LNPEPQ9UIQ6 1025 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 PTCH2Q9Y6C5 1203 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 MAD1L1Q9Y6D9 718 aa10.77□□□□□ -0.68
PABPC1-224ENST00000610907 CXorf49A8MYA2 514 aaPredicted RBP10.77□□□□□ -0.69
PABPC1-224ENST00000610907 PTGESO14684 152 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 BIRC5O15392 142 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 MTSS1O43312 755 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 RFPL1O75677 317 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 PIAS1O75925 651 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 F9P00740 461 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 KRT16P08779 473 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 RPL9P32969 192 aaKnown RBP10.77□□□□□ -0.69
PABPC1-224ENST00000610907 CRHR1P34998 444 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 ARFIP2P53365 341 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 PURAQ00577 322 aaKnown RBP10.77□□□□□ -0.69
PABPC1-224ENST00000610907 DEUP1Q05D60 604 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 GPR162Q16538 588 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 FSCN1Q16658 493 aaKnown RBP10.77□□□□□ -0.69
PABPC1-224ENST00000610907 CLEC20AQ6ZU45 233 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 MARK2Q7KZI7 788 aaKnown RBP10.77□□□□□ -0.69
PABPC1-224ENST00000610907 RSPH3Q86UC2 560 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 FAM131BQ86XD5 332 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 COLGALT1Q8NBJ5 622 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 ARRDC4Q8NCT1 418 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 CDKL2Q92772 493 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 C7orf26Q96N11 449 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
PABPC1-224ENST00000610907 GOLGA2P5Q9HBQ8 144 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 NPHS2Q9NP85 383 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 FLRT1Q9NZU1 646 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 IGSF9Q9P2J2 1179 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 ZFP69BQ9UJL9 534 aa10.77□□□□□ -0.69
PABPC1-224ENST00000610907 WDR91A4D1P6 747 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 MANSC4A6NHS7 340 aaPredicted RBP10.76□□□□□ -0.69
PABPC1-224ENST00000610907 M0QYT0 321 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 EEF2KO00418 725 aaKnown RBP10.76□□□□□ -0.69
PABPC1-224ENST00000610907 CELF2O95319 508 aaKnown RBP10.76□□□□□ -0.69
PABPC1-224ENST00000610907 MAP3K6O95382 1288 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 ADRA1BP35368 520 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 TKTL1P51854 596 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 MRPS6P82932 125 aaKnown RBP10.76□□□□□ -0.69
PABPC1-224ENST00000610907 DPYSQ14117 519 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 FRG1Q14331 258 aaKnown RBP10.76□□□□□ -0.69
PABPC1-224ENST00000610907 RAB41Q5JT25 222 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 SYCP2LQ5T4T6 812 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 OTUD1Q5VV17 481 aaPredicted RBP10.76□□□□□ -0.69
PABPC1-224ENST00000610907 WSCD1Q658N2 575 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 FAM91A1Q658Y4 838 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 KYAT3Q6YP21 454 aaKnown RBP10.76□□□□□ -0.69
PABPC1-224ENST00000610907 SH3TC2Q8TF17 1288 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 SOCS4Q8WXH5 440 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 P2RY11Q96G91 374 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 OXNAD1Q96HP4 312 aaPredicted RBP10.76□□□□□ -0.69
PABPC1-224ENST00000610907 SENP8Q96LD8 212 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 APBA2Q99767 749 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 MED10Q9BTT4 135 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 TLE6Q9H808 572 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 SMYD2Q9NRG4 433 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 DDX43Q9NXZ2 648 aaKnown RBP10.76□□□□□ -0.69
PABPC1-224ENST00000610907 SIRPGQ9P1W8 387 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 CDH9Q9ULB4 789 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 GIT1Q9Y2X7 761 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 TRPV2Q9Y5S1 764 aa10.76□□□□□ -0.69
PABPC1-224ENST00000610907 ERI2A8K979 691 aaKnown RBP10.75□□□□□ -0.69
PABPC1-224ENST00000610907 I3L4J1 428 aa10.75□□□□□ -0.69
PABPC1-224ENST00000610907 RNF103O00237 685 aa10.75□□□□□ -0.69
PABPC1-224ENST00000610907 CAPN9O14815 690 aa10.75□□□□□ -0.69
PABPC1-224ENST00000610907 DCLK1O15075 740 aa10.75□□□□□ -0.69
PABPC1-224ENST00000610907 MFSD11O43934 449 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms