RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 IGSF9Q9P2J2 1179 aa12.31□□□□□ -0.44
TP53-220ENST00000610623 ZNF112Q9UJU3 913 aa12.31□□□□□ -0.44
TP53-220ENST00000610623 ARHGAP26Q9UNA1 814 aa12.31□□□□□ -0.44
TP53-220ENST00000610623 CCDC195A0A1B0GUA6 201 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 KBTBD13C9JR72 458 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 NFIBO00712 420 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 TMEM63AO94886 807 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 RECKO95980 971 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 EGFRP00533 1210 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 CRHR1P34998 444 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 PPARGP37231 505 aaPredicted RBP12.3□□□□□ -0.44
TP53-220ENST00000610623 TAGLNQ01995 201 aaKnown RBP12.3□□□□□ -0.44
TP53-220ENST00000610623 C16orf72Q14CZ0 275 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 TBC1D10BQ4KMP7 808 aaPredicted RBP12.3□□□□□ -0.44
TP53-220ENST00000610623 MIER3Q7Z3K6 550 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 RSAD2Q8WXG1 361 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 CCDC127Q96BQ5 260 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 COL20A1Q9P218 1284 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 WRAP73Q9P2S5 460 aaPredicted RBP12.3□□□□□ -0.44
TP53-220ENST00000610623 STK39Q9UEW8 545 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 GJA3Q9Y6H8 435 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 TEX264Q9Y6I9 313 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 PHIPQ8WWQ0 1821 aa12.3□□□□□ -0.44
TP53-220ENST00000610623 FBP2O00757 339 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 RFPL1O75677 317 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 NOMO3P69849 1222 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 TKFCQ3LXA3 575 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 XRRA1Q6P2D8 792 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 SAMD7Q7Z3H4 446 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 AMIGO2Q86SJ2 522 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 CBWD2Q8IUF1 395 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 IGDCC3Q8IVU1 814 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 SYTL5Q8TDW5 730 aaPredicted RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 SERPINI1Q99574 410 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 LXNQ9BS40 222 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 APOL6Q9BWW8 343 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 RPAP3Q9H6T3 665 aaPredicted RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 TBC1D22BQ9NU19 505 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 DNAJC28Q9NX36 388 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 RIMS3Q9UJD0 308 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 PRPF19Q9UMS4 504 aaKnown RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 TCRBV7S3A2A0A539 114 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 H0YJX3 145 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 ZNF701M0R085 212 aaPredicted RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 CYB561D2O14569 222 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 TRDMT1O14717 391 aaKnown RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 ADCY6O43306 1168 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 KRT38O76015 456 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 CALCAP01258 141 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 P4HBP07237 508 aaKnown RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 PSMC3P17980 439 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 ITGB5P18084 799 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 STT3AP46977 705 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 ENTPD1P49961 510 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 GDF10P55107 478 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 YWHAGP61981 247 aaKnown RBP eCLIP12.29□□□□□ -0.44
TP53-220ENST00000610623 TUBA4AP68366 448 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 GK3PQ14409 553 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 NR6A1Q15406 480 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 ZNF423Q2M1K9 1284 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 WDR78Q5VTH9 848 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 TMEM53Q6P2H8 277 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 PAOXQ6QHF9 649 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 SV2AQ7L0J3 742 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 HAUS6Q7Z4H7 955 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 CPXCR1Q8N123 301 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 SGF29Q96ES7 293 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 C12orf42Q96LP6 360 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 TRIM56Q9BRZ2 755 aaKnown RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 RTKNQ9BST9 563 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 SLC13A1Q9BZW2 595 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 VPS45Q9NRW7 570 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 KCNH7Q9NS40 1196 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 C1orf112Q9NSG2 853 aa12.29□□□□□ -0.44
TP53-220ENST00000610623 TUBA8Q9NY65 449 aaPredicted RBP12.29□□□□□ -0.44
TP53-220ENST00000610623 DICER1Q9UPY3 1922 aaKnown RBP12.28□□□□□ -0.44
TP53-220ENST00000610623 CCDC162PA2VCL2 907 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 GOLGA8IPA6NC78 632 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 TMEM191CA6NGB0 347 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 GOLGA8JA6NMD2 632 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 PDGFRBP09619 1106 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 TMEM191BP0C7N4 346 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 SOX11P35716 441 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 OAZ1P54368 228 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 BACE1P56817 501 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 PSMC5P62195 406 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 ENPEPQ07075 957 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 TGFBIQ15582 683 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 C6orf52Q5T4I8 152 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 STXBP5Q5T5C0 1151 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 NBPF12Q5TAG4 269 aaPredicted RBP12.28□□□□□ -0.44
TP53-220ENST00000610623 PDPK2PQ6A1A2 396 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 ELMSAN1Q6PJG2 1045 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 ISLR2Q6UXK2 745 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 ABRAQ8N0Z2 381 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 LZTR1Q8N653 840 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 PPP1R14CQ8TAE6 165 aa12.28□□□□□ -0.44
TP53-220ENST00000610623 TFB1MQ8WVM0 346 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms