RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CSHL1Q14406 222 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 TMC3Q7Z5M5 1100 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 NECAB2Q7Z6G3 386 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 MICALL2Q8IY33 904 aa9.84□□□□□ -0.83
CSMD1-217ENST00000602723 KBTBD13C9JR72 458 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ARHGAP15Q53QZ3 475 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 DAGLAQ9Y4D2 1042 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 BTN3A3O00478 584 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 FRG1Q14331 258 aaKnown RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 SKIV2LQ15477 1246 aaKnown RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 TMEM132CQ8N3T6 1108 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 POU5F2Q8N7G0 328 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 OSBPL6Q9BZF3 934 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 PCDH9Q9HC56 1237 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 AP4E1Q9UPM8 1137 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ERVK-10P10266 1014 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 RXRBP28702 533 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 NSMCE2Q96MF7 247 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 APOL2Q9BQE5 337 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 SIK3Q9Y2K2 1263 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 NCAM2O15394 837 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 TKTP29401 623 aaKnown RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 PCNX4Q63HM2 1172 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ACOX2Q99424 681 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 BTBD3Q9Y2F9 522 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ARID1AO14497 2285 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 TNS3Q68CZ2 1445 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 NDUFB5O43674 189 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 WARSP23381 471 aaKnown RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 JAK1P23458 1154 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 MXRA8Q9BRK3 442 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 EHD3Q9NZN3 535 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 DNAJC5BQ9UF47 199 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 LIMD1Q9UGP4 676 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 BIRC5O15392 142 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ZC3H11AO75152 810 aaKnown RBP eCLIP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 NR3C2P08235 984 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 GHRP10912 638 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 HERVK_113P62684 666 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF844Q08AG5 666 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ITGA9Q13797 1035 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 KCTD21Q4G0X4 260 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 DNAJC14Q6Y2X3 702 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 B3GNT6Q6ZMB0 384 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 FNDC5Q8NAU1 212 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 RPRD1AQ96P16 312 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ISCA1Q9BUE6 129 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ANKZF1Q9H8Y5 726 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 RWDD3Q9Y3V2 267 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 C2CD2LO14523 706 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ATP5BP06576 529 aaKnown RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 TSPAN19P0C672 248 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ALDH9A1P49189 494 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 OXCT1P55809 520 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ZCCHC8Q6NZY4 707 aaKnown RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 RNASE11Q8TAA1 199 aaKnown RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 FBXO32Q969P5 355 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 KRT6AP02538 564 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 MCL1Q07820 350 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 SBK1Q52WX2 424 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 C2CD6Q53TS8 623 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF438Q7Z4V0 828 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 SEPT12Q8IYM1 358 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 RNF145Q96MT1 663 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 FBXO21O94952 628 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 MAP3K14Q99558 947 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ELP3Q9H9T3 547 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 ENTPD7Q9NQZ7 604 aa9.83□□□□□ -0.84
CSMD1-217ENST00000602723 NUP214P35658 2090 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-217ENST00000602723 SLC2A4P14672 509 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 ALDH5A1P51649 535 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-217ENST00000602723 SNAPC2Q13487 334 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 BMPR2Q13873 1038 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 POU6F1Q14863 301 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 ACOT1Q86TX2 421 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 SEMA4DQ92854 862 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 RPRD1BQ9NQG5 326 aaKnown RBP9.82□□□□□ -0.84
CSMD1-217ENST00000602723 RABGEF1Q9UJ41 708 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 NAALADL1Q9UQQ1 740 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 ABCA9Q8IUA7 1624 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 KNTC1P50748 2209 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 CCDC130P13994 396 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 TIMM50Q3ZCQ8 353 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 SP8Q8IXZ3 490 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 ADGRF2Q8IZF7 708 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 CPNE1Q99829 537 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 UGT2B28Q9BY64 529 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF518BQ9C0D4 1074 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 SEMA6AQ9H2E6 1030 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 KLHL28Q9NXS3 571 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 BAZ2AQ9UIF9 1905 aaKnown RBP9.82□□□□□ -0.84
CSMD1-217ENST00000602723 MAGEB16A2A368 324 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 GAS2O43903 313 aaKnown RBP9.82□□□□□ -0.84
CSMD1-217ENST00000602723 UPP2O95045 317 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 OR1G1P47890 313 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 PYDC1Q8WXC3 89 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 PHF21BQ96EK2 531 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 ARMCX1Q9P291 453 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 MCM8Q9UJA3 840 aa9.82□□□□□ -0.84
CSMD1-217ENST00000602723 WDR27A2RRH5 827 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms