RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 NCAM1P13591 858 aa24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 CD44P16070 742 aaKnown RBP24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 ZNF132P52740 706 aa24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 LRRC63Q05C16 580 aa24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 EIF4HQ15056 248 aaKnown RBP24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 RGL4Q8IZJ4 473 aa24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 FOXJ1Q92949 421 aa24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 KAT5Q92993 513 aa24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 SMARCE1Q969G3 411 aa24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 ADAM33Q9BZ11 813 aa24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 CIPCQ9C0C6 399 aa24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 OLA1Q9NTK5 396 aaKnown RBP24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 DNAAF2Q9NVR5 837 aaKnown RBP24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 HBS1LQ9Y450 684 aaKnown RBP24.28■■□□□ 1.48
GTPBP3-227ENST00000602056 RNF225M0QZC1 329 aaPredicted RBP24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 GJB3O75712 270 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 SMC2O95347 1197 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 CALCAP01258 141 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 SETSIPP0DME0 302 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 HLA-FP30511 346 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 FMO5P49326 533 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 TPMTP51580 245 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 DAOAP59103 153 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 YWHAEP62258 255 aaKnown RBP24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 SIM1P81133 766 aaPredicted RBP24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 PLEKHG6Q3KR16 790 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 ISM2Q6H9L7 571 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 LCLAT1Q6UWP7 414 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 HDDC3Q8N4P3 179 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 DNASE2BQ8WZ79 361 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 GATA6Q92908 595 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 SIPA1Q96FS4 1042 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 IPO9Q96P70 1041 aaKnown RBP24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 GPR174Q9BXC1 333 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 KIAA1257Q9ULG3 409 aa24.27■■□□□ 1.48
GTPBP3-227ENST00000602056 HYAL3O43820 417 aaPredicted RBP24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 SYNCRIPO60506 623 aaKnown RBP24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 IGLV3-19P01714 112 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 HLA-EP13747 358 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 LCP1P13796 627 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 TBXAS1P24557 533 aaPredicted RBP24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 HARS2P49590 506 aaKnown RBP24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 RGS7P49802 495 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 SGSHP51688 502 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 MPPE1Q53F39 396 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 SYCP2LQ5T4T6 812 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 PMF1Q6P1K2 205 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 TMEM270Q6UE05 265 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 SIX6OS1Q8N1H7 587 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 SCML4Q8N228 414 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 LMO3Q8TAP4 145 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 RNF139Q8WU17 664 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 SLC35F5Q8WV83 523 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 CNGB3Q9NQW8 809 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 IGF2RP11717 2491 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 PCNX2A6NKB5 2137 aa24.26■■□□□ 1.47
GTPBP3-227ENST00000602056 PMM2O15305 246 aa24.25■■□□□ 1.47
GTPBP3-227ENST00000602056 TIMM44O43615 452 aa24.25■■□□□ 1.47
GTPBP3-227ENST00000602056 SYPP08247 313 aa24.25■■□□□ 1.47
GTPBP3-227ENST00000602056 WDR45BQ5MNZ6 344 aa24.25■■□□□ 1.47
GTPBP3-227ENST00000602056 CACUL1Q86Y37 369 aa24.25■■□□□ 1.47
GTPBP3-227ENST00000602056 KDF1Q8NAX2 398 aaPredicted RBP24.25■■□□□ 1.47
GTPBP3-227ENST00000602056 CAMK1GQ96NX5 476 aa24.25■■□□□ 1.47
GTPBP3-227ENST00000602056 ABCC13Q9NSE7 274 aa24.25■■□□□ 1.47
GTPBP3-227ENST00000602056 PIK3R2O00459 728 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 EPHX1P07099 455 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 PAEPP09466 180 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 BMP6P22004 513 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 ADGRF1Q5T601 910 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 MSANTD2Q6P1R3 559 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 SERPINA13PQ6UXR4 307 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 KIAA0907Q7Z7F0 614 aaPredicted RBP24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 ADIPOR2Q86V24 386 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 CADM4Q8NFZ8 388 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 CLEC4CQ8WTT0 213 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 CYB5D2Q8WUJ1 264 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 PRCCQ92733 491 aaPredicted RBP24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 TMA16Q96EY4 203 aaKnown RBP24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 TIGD1Q96MW7 591 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 TMEM245Q9H330 911 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 METTL14Q9HCE5 456 aaKnown RBP24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 SUSD2Q9UGT4 822 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 MAN1B1Q9UKM7 699 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 ZMIZ1Q9ULJ6 1067 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 NFE2L3Q9Y4A8 694 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 PCDHB4Q9Y5E5 795 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 CHD6Q8TD26 2715 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 CFAP47Q6ZTR5 3102 aa24.24■■□□□ 1.47
GTPBP3-227ENST00000602056 GOLGA6L4A6NEF3 574 aa24.23■■□□□ 1.47
GTPBP3-227ENST00000602056 METTL12A8MUP2 240 aa24.23■■□□□ 1.47
GTPBP3-227ENST00000602056 LATS1O95835 1130 aa24.23■■□□□ 1.47
GTPBP3-227ENST00000602056 IGLV3-27P01718 113 aa24.23■■□□□ 1.47
GTPBP3-227ENST00000602056 BRD2P25440 801 aaKnown RBP24.23■■□□□ 1.47
GTPBP3-227ENST00000602056 GRIK2Q13002 908 aa24.23■■□□□ 1.47
GTPBP3-227ENST00000602056 CAMK2GQ13555 558 aaPredicted RBP24.23■■□□□ 1.47
GTPBP3-227ENST00000602056 CNGA2Q16280 664 aa24.23■■□□□ 1.47
GTPBP3-227ENST00000602056 DCAF12L1Q5VU92 463 aa24.23■■□□□ 1.47
GTPBP3-227ENST00000602056 TTI2Q6NXR4 508 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms