RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FSHRP23945 695 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 YWHAQP27348 245 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 ARHGAP25P42331 645 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 FNTBP49356 437 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 DAOAP59103 153 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 MAMLD1Q13495 774 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 GAS6Q14393 721 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 PLEKHA7Q6IQ23 1121 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 LILRA6Q6PI73 481 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 SLC26A9Q7LBE3 791 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 LONP2Q86WA8 852 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 LURAP1LQ8IV03 231 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 REXO1L1PQ8IX06 675 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 SCML4Q8N228 414 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 ARHGAP18Q8N392 663 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 C17orf53Q8N3J3 647 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 RNF10Q8N5U6 811 aaKnown RBP12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 SCAMP5Q8TAC9 235 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 SLC35G2Q8TBE7 412 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 CLEC4CQ8WTT0 213 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 MCRS1Q96EZ8 462 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 MCEEQ96PE7 176 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 SLITRK1Q96PX8 696 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 ASNSD1Q9NWL6 643 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 UXTQ9UBK9 157 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 CHORDC1Q9UHD1 332 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 ANAPC7Q9UJX3 599 aa12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 MAGED2Q9UNF1 606 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-213ENST00000597325 SIGLEC16A6NMB1 481 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 K7ESF4 209 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 AXIN1O15169 862 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 BUB1O43683 1085 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 DAB1O75553 588 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 GABBR2O75899 941 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 PAPSS2O95340 614 aaPredicted RBP12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 GLI1P08151 1106 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 COL4A2P08572 1712 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 RNASE9P60153 205 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 TCEAL1Q15170 157 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 PROSER1Q86XN7 944 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 STKLD1Q8NE28 680 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 FGF13Q92913 245 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 KXD1Q9BQD3 176 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 SCML2Q9UQR0 700 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 NEUROG3Q9Y4Z2 214 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 ASB3Q9Y575 518 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 USP3Q9Y6I4 520 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 DUSP10Q9Y6W6 482 aa12.58□□□□□ -0.4
SHKBP1-213ENST00000597325 NOTCH4Q99466 2003 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 COL12A1Q99715 3063 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 TCRBV5S1A1TA0A578 114 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 MYO1FO00160 1098 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 CAPN9O14815 690 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 XYLBO75191 536 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 GRAP2O75791 330 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 ZMYND10O75800 440 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 MTA2O94776 668 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 EPN2O95208 641 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 MOCS3O95396 460 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 GJB6O95452 261 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 LTFP02788 710 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 HNRNPA1P09651 372 aaKnown RBP eCLIP12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 GPD1P21695 349 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 HOXA9P31269 272 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 CXCL12P48061 93 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 HADHBP55084 474 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 USP46P62068 366 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 YWHAZP63104 245 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 PPP1R15BQ5SWA1 713 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 PM20D1Q6GTS8 502 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 C19orf48Q6RUI8 117 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 SYCE1Q8N0S2 351 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 PSMG2Q969U7 264 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 TRMT2BQ96GJ1 504 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 PIWIL1Q96J94 861 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 LOXL4Q96JB6 756 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 TTLL2Q9BWV7 592 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 POPDC2Q9HBU9 364 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 TLR8Q9NR97 1041 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 GMIPQ9P107 970 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 STAP1Q9ULZ2 295 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 NDRG2Q9UN36 371 aaKnown RBP12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 PAXBP1Q9Y5B6 917 aa12.57□□□□□ -0.4
SHKBP1-213ENST00000597325 TICRRQ7Z2Z1 1910 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 YJEFN3A6XGL0 299 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 TMEM110-MUSTN1A8MSY1 372 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 ESPNB1AK53 854 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 E7ENQ6 273 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 CCL16O15467 120 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 PSMA2P25787 234 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 SDC4P31431 198 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 PSEN1P49768 467 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 YWHAGP61981 247 aaKnown RBP eCLIP12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 NTHL1P78549 312 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 TAF10Q12962 218 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 SH3PXD2AQ5TCZ1 1133 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms