RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 IL17RCQ8NAC3 791 aa21.94■■□□□ 1.1
PNKP-209ENST00000596726 SUMF1Q8NBK3 374 aa21.94■■□□□ 1.1
PNKP-209ENST00000596726 ADAM32Q8TC27 787 aa21.94■■□□□ 1.1
PNKP-209ENST00000596726 IRX2Q9BZI1 471 aaPredicted RBP21.94■■□□□ 1.1
PNKP-209ENST00000596726 SLC27A6Q9Y2P4 619 aa21.94■■□□□ 1.1
PNKP-209ENST00000596726 A0A1B0GTH6 734 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 CAVIN2O95810 425 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 LMNAP02545 664 aaKnown RBP21.93■■□□□ 1.1
PNKP-209ENST00000596726 CYP1A1P04798 512 aaPredicted RBP21.93■■□□□ 1.1
PNKP-209ENST00000596726 SLC11A2P49281 568 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 FMO1Q01740 532 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 FILIP1LQ4L180 1135 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 DCAF6Q58WW2 860 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 FAM133BQ5BKY9 247 aaKnown RBP21.93■■□□□ 1.1
PNKP-209ENST00000596726 RIF1Q5UIP0 2472 aaKnown RBP21.93■■□□□ 1.1
PNKP-209ENST00000596726 WDR87Q6ZQQ6 2873 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 ERICH1Q86X53 443 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 ALLCQ8N6M5 410 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 DDI1Q8WTU0 396 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 C18orf8Q96DM3 657 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 NAP1L5Q96NT1 182 aaPredicted RBP21.93■■□□□ 1.1
PNKP-209ENST00000596726 EPC1Q9H2F5 836 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 SYNCQ9H7C4 482 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 CLEC4EQ9ULY5 219 aa21.93■■□□□ 1.1
PNKP-209ENST00000596726 FRYLO94915 3013 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 PRRT4C9JH25 899 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 KLF8O95600 359 aaPredicted RBP21.92■■□□□ 1.1
PNKP-209ENST00000596726 HOXD9P28356 352 aaPredicted RBP21.92■■□□□ 1.1
PNKP-209ENST00000596726 CNR2P34972 360 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 SCNN1AP37088 669 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 C10orf76Q5T2E6 689 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 HEATR6Q6AI08 1181 aaKnown RBP21.92■■□□□ 1.1
PNKP-209ENST00000596726 NADSYN1Q6IA69 706 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 LUZP1Q86V48 1076 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 XYLT1Q86Y38 959 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 CCDC33Q8N5R6 958 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 TXNDC5Q8NBS9 432 aaKnown RBP21.92■■□□□ 1.1
PNKP-209ENST00000596726 HHIPQ96QV1 700 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 SLC2A11Q9BYW1 496 aa21.92■■□□□ 1.1
PNKP-209ENST00000596726 FAM186AA6NE01 2351 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 GOLGA6L7A0A1B0GV03 622 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 SGK1O00141 431 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 HRO43593 1189 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 TSPAN3O60637 253 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 ADAM23O75077 832 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 DAB1O75553 588 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 GRAP2O75791 330 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 SLC6A4P31645 630 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 CDK17Q00537 523 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 NR1I3Q14994 352 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 CRY1Q16526 586 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 PIK3R6Q5UE93 754 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 NAA35Q5VZE5 725 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 RNF43Q68DV7 783 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 CPA5Q8WXQ8 436 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 TMA16Q96EY4 203 aaKnown RBP21.91■■□□□ 1.1
PNKP-209ENST00000596726 EBF1Q9UH73 591 aa21.91■■□□□ 1.1
PNKP-209ENST00000596726 OTOGLQ3ZCN5 2332 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 A0A1W2PQC6 194 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 APBB3O95704 486 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 HNRNPLP14866 589 aaKnown RBP eCLIP21.9■■□□□ 1.1
PNKP-209ENST00000596726 NOS2P35228 1153 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 PXNP49023 591 aaPredicted RBP21.9■■□□□ 1.1
PNKP-209ENST00000596726 SGSHP51688 502 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 ZC3H12AQ5D1E8 599 aaKnown RBP21.9■■□□□ 1.1
PNKP-209ENST00000596726 EOGTQ5NDL2 527 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 MPP7Q5T2T1 576 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 RFWD3Q6PCD5 774 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 TMEM92Q6UXU6 159 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 TRIM72Q6ZMU5 477 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 CACNA2D4Q7Z3S7 1137 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 TRMT11Q7Z4G4 463 aaKnown RBP21.9■■□□□ 1.1
PNKP-209ENST00000596726 ZNF513Q8N8E2 541 aaPredicted RBP21.9■■□□□ 1.1
PNKP-209ENST00000596726 BAP1Q92560 729 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 ZDHHC4Q9NPG8 344 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.9■■□□□ 1.1
PNKP-209ENST00000596726 MYO6Q9UM54 1294 aa21.9■■□□□ 1.1
PNKP-209ENST00000596726 UNGP13051 313 aaPredicted RBP21.89■■□□□ 1.09
PNKP-209ENST00000596726 MATKP42679 507 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 DGKEP52429 567 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 GEN1Q17RS7 908 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 C2CD6Q53TS8 623 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 EGFLAMQ63HQ2 1017 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 MSANTD4Q8NCY6 345 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 NT5C3BQ969T7 300 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 PCDHB18PQ96TA0 734 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 DDX50Q9BQ39 737 aaKnown RBP21.89■■□□□ 1.09
PNKP-209ENST00000596726 RRN3Q9NYV6 651 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 XPO7Q9UIA9 1087 aaKnown RBP21.89■■□□□ 1.09
PNKP-209ENST00000596726 SPAG17Q6Q759 2223 aa21.89■■□□□ 1.09
PNKP-209ENST00000596726 GPR179Q6PRD1 2367 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 KCNU1A8MYU2 1149 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 SERPINC1P01008 464 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 APOEP02649 317 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 MMP8P22894 467 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 GBP1P32455 592 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 TPM4P67936 248 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 FANCCQ00597 558 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 ARID5AQ03989 594 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 SRSF5Q13243 272 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms