RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 ATG16L1Q676U5 607 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 GALNT18Q6P9A2 607 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 DENND5BQ6ZUT9 1274 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 USP49Q70CQ1 688 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 H1FNTQ75WM6 255 aaPredicted RBP4.5□□□□□ -1.69
LINC00649-204ENST00000593977 VSIG10LQ86VR7 867 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 DCP2Q8IU60 420 aaKnown RBP4.5□□□□□ -1.69
LINC00649-204ENST00000593977 ARMC8Q8IUR7 673 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 UNC45BQ8IWX7 931 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 TTC39CQ8N584 583 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 ANKS4BQ8N8V4 417 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 SPC24Q8NBT2 197 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 GDAP1Q8TB36 358 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 SH3RF3Q8TEJ3 882 aaPredicted RBP4.5□□□□□ -1.69
LINC00649-204ENST00000593977 USP6NLQ92738 828 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 EDAQ92838 391 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 FATE1Q969F0 183 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 RAB24Q969Q5 203 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 NOX5Q96PH1 765 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 SIN3AQ96ST3 1273 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 REEP2Q9BRK0 252 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 HGH1Q9BTY7 390 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 MYL10Q9BUA6 226 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 UTP14AQ9BVJ6 771 aaKnown RBP4.5□□□□□ -1.69
LINC00649-204ENST00000593977 AP5M1Q9H0R1 490 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 NDST4Q9H3R1 872 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 ABHD16BQ9H3Z7 469 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 DECR2Q9NUI1 292 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 RGL1Q9NZL6 768 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 LMCD1Q9NZU5 365 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 IMPACTQ9P2X3 320 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 ASH2LQ9UBL3 628 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 LPAR3Q9UBY5 353 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 CHORDC1Q9UHD1 332 aaPredicted RBP4.5□□□□□ -1.69
LINC00649-204ENST00000593977 SCOCQ9UIL1 159 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 SH3BGRL2Q9UJC5 107 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 VAV3Q9UKW4 847 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 SMG5Q9UPR3 1016 aaKnown RBP4.5□□□□□ -1.69
LINC00649-204ENST00000593977 HDAC5Q9UQL6 1122 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 USP15Q9Y4E8 981 aaPredicted RBP4.5□□□□□ -1.69
LINC00649-204ENST00000593977 ASB1Q9Y576 335 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 PCDHB4Q9Y5E5 795 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 PSAT1Q9Y617 370 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 HS3ST4Q9Y661 456 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 COL4A1P02462 1669 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 NBEAQ8NFP9 2946 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 DOPEY1Q5JWR5 2465 aa4.5□□□□□ -1.69
LINC00649-204ENST00000593977 SPEF2Q9C093 1822 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 IGF2RP11717 2491 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 A0A1W2PQJ5 194 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 CLRN2A0PK11 232 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 TMEM221A6NGB7 291 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 CLCA1A8K7I4 914 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 PTGES3LE9PB15 166 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 M0R296 226 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 VILLO15195 856 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 TSPAN3O60637 253 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 FMO6PO60774 539 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 TBX10O75333 385 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 TSPAN9O75954 239 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 UFL1O94874 794 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 PRPF6O94906 941 aaKnown RBP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 APOL3O95236 402 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 SLU7O95391 586 aaKnown RBP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 IGLV1-40P01703 118 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 PRKCBP05771 671 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 CELA3BP08861 270 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 SNRPA1P09661 255 aaKnown RBP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 LAMP2P13473 410 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 GSPT1P15170 499 aaKnown RBP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 IFNAR1P17181 557 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 AVPR2P30518 371 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 ARL3P36405 182 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 CHRNA4P43681 627 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 CSE1LP55060 971 aaKnown RBP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 VCPP55072 806 aaKnown RBP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 MVKQ03426 396 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 PRKCQQ04759 706 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 CHRNEQ04844 493 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 PPATQ06203 517 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 PPP3CAQ08209 521 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 IFT88Q13099 833 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 MAMLD1Q13495 774 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 PRPF4BQ13523 1007 aaKnown RBP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 SPIDRQ14159 915 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 COG2Q14746 738 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 TAF7Q15545 349 aaPredicted RBP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 TBCCQ15814 346 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 ADIPOQQ15848 244 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 KYNUQ16719 465 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 KHDC1Q4VXA5 237 aaKnown RBP4.49□□□□□ -1.69
LINC00649-204ENST00000593977 KHDC1LQ5JSQ8 128 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 MCTP2Q6DN12 878 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 CRTC1Q6UUV9 634 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 UNQ6494/PRO21346Q6UXR6 183 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 CEP128Q6ZU80 1094 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 USP51Q70EK9 711 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 RNF44Q7L0R7 432 aa4.49□□□□□ -1.69
LINC00649-204ENST00000593977 RRAGAQ7L523 313 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms