RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ARHGAP18Q8N392 663 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 CPXM2Q8N436 756 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 CADM4Q8NFZ8 388 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 SETD7Q8WTS6 366 aaKnown RBP18.29■□□□□ 0.52
RETREG3-212ENST00000593251 ADAMTS14Q8WXS8 1223 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 TATDN2Q93075 761 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 CCDC47Q96A33 483 aaKnown RBP18.29■□□□□ 0.52
RETREG3-212ENST00000593251 ULBP1Q9BZM6 244 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 ZDHHC5Q9C0B5 715 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 GAREM1Q9H706 876 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 SLCO1B1Q9Y6L6 691 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 ANKRD11Q6UB99 2663 aaPredicted RBP18.29■□□□□ 0.52
RETREG3-212ENST00000593251 ATRXP46100 2492 aa18.29■□□□□ 0.52
RETREG3-212ENST00000593251 METTL12A8MUP2 240 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 BCAT2O15382 392 aaPredicted RBP18.28■□□□□ 0.52
RETREG3-212ENST00000593251 CBFA2T3O75081 653 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 RPL13P26373 211 aaKnown RBP18.28■□□□□ 0.52
RETREG3-212ENST00000593251 OXTRP30559 389 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 SYKP43405 635 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 ARID5AQ03989 594 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 DPYDQ12882 1025 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 ZNF366Q8N895 744 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 SNX19Q92543 992 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 SPATA32Q96LK8 384 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 NUP58Q9BVL2 599 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 PCOLCE2Q9UKZ9 415 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 FNDC3AQ9Y2H6 1198 aaKnown RBP18.28■□□□□ 0.52
RETREG3-212ENST00000593251 NFE2L3Q9Y4A8 694 aa18.28■□□□□ 0.52
RETREG3-212ENST00000593251 PLXNA2O75051 1894 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 ZBED1O96006 694 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 MATKP42679 507 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 MXI1P50539 228 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 EIF4HQ15056 248 aaKnown RBP18.27■□□□□ 0.52
RETREG3-212ENST00000593251 GOLGA7BQ2TAP0 167 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 HLA-BQ31612 363 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 ZCWPW2Q504Y3 356 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 ARHGAP17Q68EM7 881 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 BHLHA9Q7RTU4 235 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 FMNL3Q8IVF7 1028 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 FAM217AQ8IXS0 508 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 GUF1Q8N442 669 aaKnown RBP18.27■□□□□ 0.52
RETREG3-212ENST00000593251 ANKRD52Q8NB46 1076 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 FBXL13Q8NEE6 735 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 CYB5D2Q8WUJ1 264 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 PLD4Q96BZ4 506 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 SLC2A11Q9BYW1 496 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 UBXN6Q9BZV1 441 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 TM7SF3Q9NS93 570 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 RAB20Q9NX57 234 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 SFMBT1Q9UHJ3 866 aa18.27■□□□□ 0.52
RETREG3-212ENST00000593251 APOBEC2Q9Y235 224 aaKnown RBP18.27■□□□□ 0.52
RETREG3-212ENST00000593251 LAMA5O15230 3695 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 KNL1Q8NG31 2342 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 A0A1B0GVT2 93 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 CER1O95813 267 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 IGLV3-19P01714 112 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 HOXD9P28356 352 aaPredicted RBP18.26■□□□□ 0.51
RETREG3-212ENST00000593251 GTF2H1P32780 548 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 CSNK1EP49674 416 aaKnown RBP18.26■□□□□ 0.51
RETREG3-212ENST00000593251 ENPEPQ07075 957 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 PDE4CQ08493 712 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 TRIP4Q15650 581 aaPredicted RBP18.26■□□□□ 0.51
RETREG3-212ENST00000593251 FNDC3BQ53EP0 1204 aaKnown RBP18.26■□□□□ 0.51
RETREG3-212ENST00000593251 C19orf48Q6RUI8 117 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 SMYD4Q8IYR2 804 aaPredicted RBP18.26■□□□□ 0.51
RETREG3-212ENST00000593251 OR2T3Q8NH03 318 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 C1orf216Q8TAB5 229 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 EDEM1Q92611 657 aa18.26■□□□□ 0.51
RETREG3-212ENST00000593251 C6orf106Q9H6K1 298 aaPredicted RBP18.26■□□□□ 0.51
RETREG3-212ENST00000593251 HLA-FP30511 346 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 ACSL1P33121 698 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 SLC8A3P57103 927 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 ADIGQ0VDE8 80 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 MPPE1Q53F39 396 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 PM20D1Q6GTS8 502 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 CCNI2Q6ZMN8 369 aaPredicted RBP18.25■□□□□ 0.51
RETREG3-212ENST00000593251 KRBA2Q6ZNG9 492 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 TTC39CQ8N584 583 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 LHX5Q9H2C1 402 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 TSPAN16Q9UKR8 245 aa18.25■□□□□ 0.51
RETREG3-212ENST00000593251 NYNRINQ9P2P1 1898 aaKnown RBP18.24■□□□□ 0.51
RETREG3-212ENST00000593251 GOLGA8CPA6NN73 597 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 MSI1O43347 362 aaKnown RBP18.24■□□□□ 0.51
RETREG3-212ENST00000593251 HARS2P49590 506 aaKnown RBP18.24■□□□□ 0.51
RETREG3-212ENST00000593251 SGSHP51688 502 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 CAMK2GQ13555 558 aaPredicted RBP18.24■□□□□ 0.51
RETREG3-212ENST00000593251 E2F5Q15329 346 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 CHST9Q7L1S5 443 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 GLRX5Q86SX6 157 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 ZC3H3Q8IXZ2 948 aaKnown RBP18.24■□□□□ 0.51
RETREG3-212ENST00000593251 UBA3Q8TBC4 463 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 MDM1Q8TC05 714 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 TMEM245Q9H330 911 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 GOLPH3LQ9H4A5 285 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 CCDC86Q9H6F5 360 aaKnown RBP18.24■□□□□ 0.51
RETREG3-212ENST00000593251 LRRC4Q9HBW1 653 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 OLA1Q9NTK5 396 aaKnown RBP18.24■□□□□ 0.51
RETREG3-212ENST00000593251 ABCB8Q9NUT2 735 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 BTBD3Q9Y2F9 522 aa18.24■□□□□ 0.51
RETREG3-212ENST00000593251 CABIN1Q9Y6J0 2220 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms