RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 CCDC134Q9H6E4 229 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 NRDE2Q9H7Z3 1164 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 KLC4Q9NSK0 619 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 GABRQQ9UN88 632 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 DNAJC16Q9Y2G8 782 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 UBE2J1Q9Y385 318 aaPredicted RBP7.08□□□□□ -1.28
VMP1-215ENST00000592619 CCNB3Q8WWL7 1395 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 ADGRA2Q96PE1 1338 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 DENND4BO75064 1496 aaPredicted RBP7.07□□□□□ -1.28
VMP1-215ENST00000592619 PLEKHH2Q8IVE3 1493 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 LMTK3Q96Q04 1460 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 BICDL2A1A5D9 508 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 SAC3D1A6NKF1 404 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 PLSCR1O15162 318 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 TSPAN3O60637 253 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 PEX11BO96011 259 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 IL6RP08887 468 aaPredicted RBP7.07□□□□□ -1.28
VMP1-215ENST00000592619 MMP8P22894 467 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 YY1P25490 414 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 GKP32189 559 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 NR1H2P55055 460 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.07□□□□□ -1.28
VMP1-215ENST00000592619 DCTN1Q14203 1278 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 TBCCQ15814 346 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 TREML2Q5T2D2 321 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 ARHGEF19Q8IW93 802 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 IL17DQ8TAD2 202 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 SLC25A43Q8WUT9 341 aaPredicted RBP7.07□□□□□ -1.28
VMP1-215ENST00000592619 HDAC2Q92769 488 aaKnown RBP7.07□□□□□ -1.28
VMP1-215ENST00000592619 HVCN1Q96D96 273 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 KTI12Q96EK9 354 aaPredicted RBP7.07□□□□□ -1.28
VMP1-215ENST00000592619 REXO5Q96IC2 774 aaKnown RBP7.07□□□□□ -1.28
VMP1-215ENST00000592619 LOXL4Q96JB6 756 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 VPS50Q96JG6 964 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 EIF3CQ99613 913 aaKnown RBP7.07□□□□□ -1.28
VMP1-215ENST00000592619 RSPH9Q9H1X1 276 aaPredicted RBP7.07□□□□□ -1.28
VMP1-215ENST00000592619 FBXO28Q9NVF7 368 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 ST6GALNAC2Q9UJ37 374 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 FZD1Q9UP38 647 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 KDM5CP41229 1560 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 SAMD9LQ8IVG5 1584 aa7.07□□□□□ -1.28
VMP1-215ENST00000592619 ZNF518AQ6AHZ1 1483 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 WDR27A2RRH5 827 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 MUSKO15146 869 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 SPRY2O43597 315 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 DHX16O60231 1041 aaKnown RBP7.06□□□□□ -1.28
VMP1-215ENST00000592619 PMPCBO75439 489 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 FESP07332 822 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 CYP21A2P08686 494 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 RBM6P78332 1123 aaKnown RBP7.06□□□□□ -1.28
VMP1-215ENST00000592619 EIF2B5Q13144 721 aaKnown RBP7.06□□□□□ -1.28
VMP1-215ENST00000592619 NFIXQ14938 502 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 PTPRRQ15256 657 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 AAK1Q2M2I8 961 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 GRHL2Q6ISB3 625 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 FAM180BQ6P0A1 224 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 KRT27Q7Z3Y8 459 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 CHST13Q8NET6 341 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 SLC2A12Q8TD20 617 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 R3HDM4Q96D70 268 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 GPR63Q9BZJ6 419 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 CHMP4BQ9H444 224 aaKnown RBP7.06□□□□□ -1.28
VMP1-215ENST00000592619 BAG5Q9UL15 447 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 POGZQ7Z3K3 1410 aa7.06□□□□□ -1.28
VMP1-215ENST00000592619 MAGI2Q86UL8 1455 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 SCAPERQ9BY12 1400 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 KIAA1107Q9UPP5 1409 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 UNC119BA6NIH7 251 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 SEPT4O43236 478 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 BAIAP3O94812 1187 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 RHOP08100 348 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 CAPN3P20807 821 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 DNASE1L3Q13609 305 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 TP53BP2Q13625 1128 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 ATG16L1Q676U5 607 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 C1orf210Q8IVY1 113 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 RFFLQ8WZ73 363 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 FAR2Q96K12 515 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 DPCDQ9BVM2 203 aaPredicted RBP7.05□□□□□ -1.28
VMP1-215ENST00000592619 SMC4Q9NTJ3 1288 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 EHD3Q9NZN3 535 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 PCDHB7Q9Y5E2 793 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 ARHGEF40Q8TER5 1519 aa7.05□□□□□ -1.28
VMP1-215ENST00000592619 HECW2Q9P2P5 1572 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 MIA2Q96PC5 1412 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 MBD3L5A6NJ08 208 aaPredicted RBP7.04□□□□□ -1.28
VMP1-215ENST00000592619 STX16-NPEPL1H3BU86 382 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 M0QZQ0 153 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 STX16O14662 325 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 NKX2-8O15522 239 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 TJP3O95049 919 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 NXPH3O95157 252 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 EGR2P11161 476 aaPredicted RBP7.04□□□□□ -1.28
VMP1-215ENST00000592619 ATP1A3P13637 1013 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 ADRA1DP25100 572 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 THBS4P35443 961 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 BMPR2Q13873 1038 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 CYP1B1Q16678 543 aa7.04□□□□□ -1.28
VMP1-215ENST00000592619 TIGD2Q4W5G0 525 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms