RNA–Protein interactions for RNA: ENST00000591417.5

HKR1-222, Transcript of HKR1, GLI-Kruppel zinc finger family member, human

TSL 4 BASIC

Gene HKR1, Length 525 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HKR1-222	ENST00000591417	NCKAP1	Q9Y2A7	1128 aa		11.94	□□□□□ -0.5
HKR1-222	ENST00000591417	SNX11	Q9Y5W9	270 aa		11.94	□□□□□ -0.5
HKR1-222	ENST00000591417	USP3	Q9Y6I4	520 aa		11.94	□□□□□ -0.5
HKR1-222	ENST00000591417	WDFY3	Q8IZQ1	3526 aa		11.94	□□□□□ -0.5
HKR1-222	ENST00000591417	FREM2	Q5SZK8	3169 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	CKAP5	Q14008	2032 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417		A0A087WV48	116 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	SLC12A8	A0AV02	714 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	PDXK	O00764	312 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	CALU	O43852	315 aa	Predicted RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	PCDHGA12	O60330	932 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	HLA-DRA	P01903	254 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	DNTT	P04053	509 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	PRKCH	P24723	683 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	ABCG1	P45844	678 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	HARS2	P49590	506 aa	Known RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	BCAT1	P54687	386 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	C21orf59	P57076	290 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	DLG4	P78352	724 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	PDE4C	Q08493	712 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	C19orf57	Q0VDD7	668 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	CAMK2G	Q13555	558 aa	Predicted RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	SMAD1	Q15797	465 aa	Known RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	TTC31	Q49AM3	519 aa	Predicted RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	CCDC157	Q569K6	752 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	CEP135	Q66GS9	1140 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	SPOPL	Q6IQ16	392 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	SHC4	Q6S5L8	630 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	TMPRSS12	Q86WS5	348 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	CACUL1	Q86Y37	369 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	GOLGA1	Q92805	767 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	PLD4	Q96BZ4	506 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	HEXIM2	Q96MH2	286 aa	Known RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	BACH2	Q9BYV9	841 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	SGK2	Q9HBY8	427 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	OLA1	Q9NTK5	396 aa	Known RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	EXOC1	Q9NV70	894 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	FTSJ1	Q9UET6	329 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	SUN2	Q9UH99	717 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	IGSF10	Q6WRI0	2623 aa		11.93	□□□□□ -0.5
HKR1-222	ENST00000591417	SHROOM3	Q8TF72	1996 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	FSBP	O95073	299 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	SEMA4F	O95754	770 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	NR3C1	P04150	777 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	ATP5B	P06576	529 aa	Known RBP	11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	KRT13	P13646	458 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	HLA-E	P13747	358 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	CD58	P19256	250 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	CD27	P26842	260 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	CASP1	P29466	404 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	ACSL1	P33121	698 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	HNF1B	P35680	557 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	VAMP7	P51809	220 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	YWHAG	P61981	247 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	CUL4B	Q13620	913 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	LRRC69	Q6ZNQ3	347 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	SORCS1	Q8WY21	1168 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	TMA16	Q96EY4	203 aa	Known RBP	11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	TWNK	Q96RR1	684 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	UBL7	Q96S82	380 aa	Predicted RBP	11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	TM9SF3	Q9HD45	589 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	BTBD3	Q9Y2F9	522 aa		11.92	□□□□□ -0.5
HKR1-222	ENST00000591417	FAM149A	A5PLN7	773 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	TK2	O00142	265 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	MAPK13	O15264	365 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	TSPAN3	O60637	253 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	SLFN14	P0C7P3	912 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	PDIA4	P13667	645 aa	Known RBP	11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	JUP	P14923	745 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	CAMK2B	Q13554	666 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	PTPRN	Q16849	979 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	C6orf118	Q5T5N4	469 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	INTS8	Q75QN2	995 aa	Known RBP	11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	CHST9	Q7L1S5	443 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	AHI1	Q8N157	1196 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	ZNF557	Q8N988	423 aa	Predicted RBP	11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	GANC	Q8TET4	914 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	CCDC47	Q96A33	483 aa	Known RBP	11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	BIRC7	Q96CA5	298 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	FAXDC2	Q96IV6	333 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	DCBLD2	Q96PD2	775 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	BBC3	Q96PG8	261 aa	Predicted RBP	11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	ACE2	Q9BYF1	805 aa	Predicted RBP	11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	NIF3L1	Q9GZT8	377 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	TMEM245	Q9H330	911 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	CLEC4E	Q9ULY5	219 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	SCML1	Q9UN30	329 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	PCDHGA1	Q9Y5H4	931 aa		11.91	□□□□□ -0.5
HKR1-222	ENST00000591417	NUMA1	Q14980	2115 aa		11.9	□□□□□ -0.5
HKR1-222	ENST00000591417		H0Y8X5	98 aa		11.9	□□□□□ -0.5
HKR1-222	ENST00000591417	KCNK3	O14649	394 aa		11.9	□□□□□ -0.5
HKR1-222	ENST00000591417	RRP8	O43159	456 aa	Known RBP	11.9	□□□□□ -0.5
HKR1-222	ENST00000591417	PAPSS1	O43252	624 aa	Predicted RBP	11.9	□□□□□ -0.5
HKR1-222	ENST00000591417	RNASEH1	O60930	286 aa	Known RBP	11.9	□□□□□ -0.5
HKR1-222	ENST00000591417	C1S	P09871	688 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 257.7 ms