RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 THOP1P52888 689 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 PKNOX1P55347 436 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 CRADDP78560 199 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 KLF10Q13118 480 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 PGM5Q15124 567 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 RARS2Q5T160 578 aaKnown RBP16.24■□□□□ 0.19
MBD1-222ENST00000590208 GSDMBQ8TAX9 411 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 PPP4R1Q8TF05 950 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 IRGQQ8WZA9 623 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 SIGLEC10Q96LC7 697 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 PIH1D1Q9NWS0 290 aaKnown RBP16.24■□□□□ 0.19
MBD1-222ENST00000590208 PAK5Q9P286 719 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 HERC5Q9UII4 1024 aaKnown RBP16.24■□□□□ 0.19
MBD1-222ENST00000590208 RIMS3Q9UJD0 308 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 SSX2IPQ9Y2D8 614 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 PIK3R2O00459 728 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 TBC1D12O60347 775 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 ENPEPQ07075 957 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 SLC10A2Q12908 348 aaPredicted RBP16.24■□□□□ 0.19
MBD1-222ENST00000590208 CBX3Q13185 183 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 ADGRE1Q14246 886 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 MTERF2Q49AM1 385 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 SLC9B1Q4ZJI4 515 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 MAPK15Q8TD08 544 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 MOCOSQ96EN8 888 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 SIKE1Q9BRV8 207 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 RSAD1Q9HA92 442 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 PDLIM7Q9NR12 457 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 ACSS2Q9NR19 701 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 DNAJC28Q9NX36 388 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 AFG3L2Q9Y4W6 797 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 PCDHA10Q9Y5I2 948 aa16.24■□□□□ 0.19
MBD1-222ENST00000590208 DKC1O60832 514 aaKnown RBP eCLIP16.23■□□□□ 0.19
MBD1-222ENST00000590208 DGKIO75912 1065 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 ERBB2P04626 1255 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 SERPINE1P05121 402 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 PRKCGP05129 697 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 RPS6P62753 249 aaKnown RBP16.23■□□□□ 0.19
MBD1-222ENST00000590208 MS4A2Q01362 244 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 FLOT2Q14254 428 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 LPIN1Q14693 890 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 WDR78Q5VTH9 848 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 ZNF534Q76KX8 674 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 CDAN1Q8IWY9 1227 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 NUP93Q8N1F7 819 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 USP13Q92995 863 aaPredicted RBP16.23■□□□□ 0.19
MBD1-222ENST00000590208 CDRT15Q96T59 188 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 PKP2Q99959 881 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 SDCBP2Q9H190 292 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 COG4Q9H9E3 785 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 RAVER2Q9HCJ3 691 aaKnown RBP16.23■□□□□ 0.19
MBD1-222ENST00000590208 GPATCH2LQ9NWQ4 482 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 GOLGA8QA0A0J9YX86 632 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 GOLGA8OA6NCC3 632 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 GOLGA8NF8WBI6 632 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 CFLARO15519 480 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 ICAM1P05362 532 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 FUT4P22083 530 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 SFNP31947 248 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 NR1H2P55055 460 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 KRT76Q01546 638 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 PRKG1Q13976 671 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 CDO1Q16878 200 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 ZNF513Q8N8E2 541 aaPredicted RBP16.23■□□□□ 0.19
MBD1-222ENST00000590208 ADAM32Q8TC27 787 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 ZNF518BQ9C0D4 1074 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 STN1Q9H668 368 aaKnown RBP16.23■□□□□ 0.19
MBD1-222ENST00000590208 TMEM216Q9P0N5 145 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 STK39Q9UEW8 545 aa16.23■□□□□ 0.19
MBD1-222ENST00000590208 DGAT1O75907 488 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 METTL18O95568 372 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 CDH5P33151 784 aaPredicted RBP16.22■□□□□ 0.19
MBD1-222ENST00000590208 SFSWAPQ12872 951 aaKnown RBP16.22■□□□□ 0.19
MBD1-222ENST00000590208 DACT2Q5SW24 774 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 TICAM1Q8IUC6 712 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 TMEM130Q8N3G9 435 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.22■□□□□ 0.19
MBD1-222ENST00000590208 DHX33Q9H6R0 707 aaKnown RBP16.22■□□□□ 0.19
MBD1-222ENST00000590208 PLK2Q9NYY3 685 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 NR2E3Q9Y5X4 410 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 XPO1O14980 1071 aaKnown RBP16.22■□□□□ 0.19
MBD1-222ENST00000590208 ATG7O95352 703 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 ZBED1O96006 694 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 F7P08709 466 aaPredicted RBP16.22■□□□□ 0.19
MBD1-222ENST00000590208 VARSP26640 1264 aaKnown RBP16.22■□□□□ 0.19
MBD1-222ENST00000590208 RAP1GAPP47736 663 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 DGKZQ13574 1117 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 NRF1Q16656 503 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 TNS4Q8IZW8 715 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 ZNF781Q8N8C0 355 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 FNDC8Q8TC99 324 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 OR52B2Q96RD2 323 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 EBNA1BP2Q99848 306 aaKnown RBP16.22■□□□□ 0.19
MBD1-222ENST00000590208 KLC2Q9H0B6 622 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 PSAT1Q9Y617 370 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 CLRN2A0PK11 232 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 STX16-NPEPL1H3BU86 382 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 HMGCRP04035 888 aa16.22■□□□□ 0.19
MBD1-222ENST00000590208 THRAP10827 490 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms