RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 FAM35AQ86V20 835 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 TMEM25Q86YD3 366 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 FUKQ8N0W3 1084 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 PNPLA1Q8N8W4 532 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 SLC2A14Q8TDB8 520 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 KCNV2Q8TDN2 545 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 ERLEC1Q96DZ1 483 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 SMARCD1Q96GM5 515 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 ACOX2Q99424 681 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 HNRNPABQ99729 332 aaKnown RBP16.46■□□□□ 0.23
NCLN-203ENST00000587740 ZNF518BQ9C0D4 1074 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 SIX2Q9NPC8 291 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 CD93Q9NPY3 652 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 EHD2Q9NZN4 543 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 URB1O60287 2271 aaKnown RBP16.45■□□□□ 0.22
NCLN-203ENST00000587740 SETXQ7Z333 2677 aaKnown RBP16.45■□□□□ 0.22
NCLN-203ENST00000587740 HOXC11O43248 304 aaPredicted RBP16.45■□□□□ 0.22
NCLN-203ENST00000587740 AP1G2O75843 785 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 SERPINC1P01008 464 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 PAEPP09466 180 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 VDRP11473 427 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 KRT5P13647 590 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 HOXB2P14652 356 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 ADORA2BP29275 332 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 APBA1Q02410 837 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 TRIP6Q15654 476 aaKnown RBP16.45■□□□□ 0.22
NCLN-203ENST00000587740 KLHDC7AQ5VTJ3 777 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 PAQR9Q6ZVX9 377 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 PDZD3Q86UT5 571 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 DDX42Q86XP3 938 aaKnown RBP eCLIP16.45■□□□□ 0.22
NCLN-203ENST00000587740 BBS7Q8IWZ6 715 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 TERB1Q8NA31 727 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 ADAMTS14Q8WXS8 1223 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 PCMTD1Q96MG8 357 aaPredicted RBP16.45■□□□□ 0.22
NCLN-203ENST00000587740 HSPA12BQ96MM6 686 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 SLITRK1Q96PX8 696 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 DNAJC12Q9UKB3 198 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 KIAA1257Q9ULG3 409 aa16.45■□□□□ 0.22
NCLN-203ENST00000587740 PTPRBP23467 1997 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 GOLGA4Q13439 2230 aaKnown RBP16.44■□□□□ 0.22
NCLN-203ENST00000587740 FTH1P19P0C7X4 201 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 FAM200BP0CF97 657 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 CD19P15391 556 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 NDUFV2P19404 249 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 NTSR1P30989 418 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 HNRNPDQ14103 355 aaKnown RBP16.44■□□□□ 0.22
NCLN-203ENST00000587740 SYCP1Q15431 976 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 COL28A1Q2UY09 1125 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 SGO2Q562F6 1265 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 C10orf76Q5T2E6 689 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 PPP1R26Q5T8A7 1209 aaPredicted RBP16.44■□□□□ 0.22
NCLN-203ENST00000587740 EGFLAMQ63HQ2 1017 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 CCNI2Q6ZMN8 369 aaPredicted RBP16.44■□□□□ 0.22
NCLN-203ENST00000587740 TRMT11Q7Z4G4 463 aaKnown RBP16.44■□□□□ 0.22
NCLN-203ENST00000587740 RBBP8NLQ8NC74 664 aaPredicted RBP16.44■□□□□ 0.22
NCLN-203ENST00000587740 OTUB2Q96DC9 234 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 SLC6A17Q9H1V8 727 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 DMAP1Q9NPF5 467 aaPredicted RBP16.44■□□□□ 0.22
NCLN-203ENST00000587740 PLCB1Q9NQ66 1216 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 KRT82Q9NSB4 513 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 DEC1Q9P2X7 70 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 CHORDC1Q9UHD1 332 aaPredicted RBP16.44■□□□□ 0.22
NCLN-203ENST00000587740 CYP8B1Q9UNU6 501 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 STARD13Q9Y3M8 1113 aa16.44■□□□□ 0.22
NCLN-203ENST00000587740 RNF225M0QZC1 329 aaPredicted RBP16.43■□□□□ 0.22
NCLN-203ENST00000587740 SYPP08247 313 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 UCHL3P15374 230 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 MAOBP27338 520 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 YWHAQP27348 245 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 USP8P40818 1118 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 MAP3K7CLP57077 242 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 SLC14A1Q13336 389 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 RAPGEF1Q13905 1077 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 ARHGAP17Q68EM7 881 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 SMYD5Q6GMV2 418 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 DPY19L2P1Q6NXN4 242 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 RABEPKQ7Z6M1 372 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 NUP93Q8N1F7 819 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 SCAMP5Q8TAC9 235 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 IPO4Q8TEX9 1081 aaKnown RBP16.43■□□□□ 0.22
NCLN-203ENST00000587740 FBXO32Q969P5 355 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 ZNF419Q96HQ0 510 aaPredicted RBP16.43■□□□□ 0.22
NCLN-203ENST00000587740 ERGIC2Q96RQ1 377 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 CCSER2Q9H7U1 834 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 RTN4Q9NQC3 1192 aaKnown RBP16.43■□□□□ 0.22
NCLN-203ENST00000587740 SPHK2Q9NRA0 654 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 CNTN6Q9UQ52 1028 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 SIK3Q9Y2K2 1263 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 CABIN1Q9Y6J0 2220 aa16.43■□□□□ 0.22
NCLN-203ENST00000587740 TEX33O43247 280 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 GREM1O60565 184 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 PGFP49763 221 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 KLK7P49862 253 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 ZNF132P52740 706 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 SLC8A3P57103 927 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 FANCCQ00597 558 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 STILQ15468 1287 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 ANO4Q32M45 955 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 PLEKHG6Q3KR16 790 aa16.42■□□□□ 0.22
NCLN-203ENST00000587740 SNX30Q5VWJ9 437 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms