RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 PLEKHG6Q3KR16 790 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 Q4G0T1 1027 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 TMEM65Q6PI78 240 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 SMCR8Q8TEV9 937 aaPredicted RBP5.02□□□□□ -1.61
VMP1-205ENST00000587470 ZBTB45Q96K62 511 aaPredicted RBP5.02□□□□□ -1.61
VMP1-205ENST00000587470 ZC3H10Q96K80 434 aaKnown RBP5.02□□□□□ -1.61
VMP1-205ENST00000587470 LRRC27Q9C0I9 530 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 METTL14Q9HCE5 456 aaKnown RBP5.02□□□□□ -1.61
VMP1-205ENST00000587470 NKX1-2Q9UD57 310 aaPredicted RBP5.02□□□□□ -1.61
VMP1-205ENST00000587470 HDAC9Q9UKV0 1011 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 USP6P35125 1406 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 TNS2Q63HR2 1409 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 BRD4O60885 1362 aaPredicted RBP5.02□□□□□ -1.61
VMP1-205ENST00000587470 KIF1AQ12756 1690 aa5.02□□□□□ -1.61
VMP1-205ENST00000587470 GOLGB1Q14789 3259 aaKnown RBP5.01□□□□□ -1.61
VMP1-205ENST00000587470 TTC21BQ7Z4L5 1316 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 H3BNC9 293 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 SCGB1D2O95969 90 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 FGBP02675 491 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 APEHP13798 732 aaKnown RBP5.01□□□□□ -1.61
VMP1-205ENST00000587470 CD19P15391 556 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 PGDP52209 483 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 ITGA8P53708 1063 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 RPS16P62249 146 aaKnown RBP5.01□□□□□ -1.61
VMP1-205ENST00000587470 GHRHRQ02643 423 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 C3orf38Q5JPI3 329 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 RNF220Q5VTB9 566 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 MRPL10Q7Z7H8 261 aaKnown RBP5.01□□□□□ -1.61
VMP1-205ENST00000587470 C16orf71Q8IYS4 520 aaPredicted RBP5.01□□□□□ -1.61
VMP1-205ENST00000587470 TCP11L2Q8N4U5 519 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 LINC01465Q8N7H1 131 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 NANOGP1Q8N7R0 232 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 PNISRQ8TF01 805 aaKnown RBP5.01□□□□□ -1.61
VMP1-205ENST00000587470 APIPQ96GX9 242 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 FAM83DQ9H4H8 585 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 TRNAU1APQ9NX07 287 aaKnown RBP5.01□□□□□ -1.61
VMP1-205ENST00000587470 COL20A1Q9P218 1284 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 PI4KBQ9UBF8 816 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 OGDHLQ9ULD0 1010 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 TOPAZ1Q8N9V7 1692 aa5.01□□□□□ -1.61
VMP1-205ENST00000587470 TRPM3Q9HCF6 1732 aaPredicted RBP5□□□□□ -1.61
VMP1-205ENST00000587470 OVOS2A0A0G2JMS6 1433 aa5□□□□□ -1.61
VMP1-205ENST00000587470 OVOS2A0A0J9YW53 1432 aa5□□□□□ -1.61
VMP1-205ENST00000587470 OVOS2Q6IE36 1432 aa5□□□□□ -1.61
VMP1-205ENST00000587470 AQP7P3A6NL99 342 aa5□□□□□ -1.61
VMP1-205ENST00000587470 EXOC5O00471 708 aa5□□□□□ -1.61
VMP1-205ENST00000587470 PIAS2O75928 621 aa5□□□□□ -1.61
VMP1-205ENST00000587470 RNF8O76064 485 aa5□□□□□ -1.61
VMP1-205ENST00000587470 INMTO95050 263 aa5□□□□□ -1.61
VMP1-205ENST00000587470 HRGP04196 525 aa5□□□□□ -1.61
VMP1-205ENST00000587470 S100BP04271 92 aaPredicted RBP5□□□□□ -1.61
VMP1-205ENST00000587470 TXNP10599 105 aaKnown RBP5□□□□□ -1.61
VMP1-205ENST00000587470 MYF5P13349 255 aa5□□□□□ -1.61
VMP1-205ENST00000587470 HGFP14210 728 aa5□□□□□ -1.61
VMP1-205ENST00000587470 TPH1P17752 444 aa5□□□□□ -1.61
VMP1-205ENST00000587470 RGS19P49795 217 aa5□□□□□ -1.61
VMP1-205ENST00000587470 CPT1AP50416 773 aa5□□□□□ -1.61
VMP1-205ENST00000587470 CCT4P50991 539 aaKnown RBP5□□□□□ -1.61
VMP1-205ENST00000587470 LARS2Q15031 903 aaKnown RBP5□□□□□ -1.61
VMP1-205ENST00000587470 POLD3Q15054 466 aaPredicted RBP5□□□□□ -1.61
VMP1-205ENST00000587470 SRGAP1Q7Z6B7 1085 aa5□□□□□ -1.61
VMP1-205ENST00000587470 LIX1LQ8IVB5 337 aa5□□□□□ -1.61
VMP1-205ENST00000587470 YAF2Q8IY57 180 aa5□□□□□ -1.61
VMP1-205ENST00000587470 GADD45GIP1Q8TAE8 222 aaPredicted RBP5□□□□□ -1.61
VMP1-205ENST00000587470 OSR1Q8TAX0 266 aaPredicted RBP5□□□□□ -1.61
VMP1-205ENST00000587470 LRTOMTQ8WZ04 291 aa5□□□□□ -1.61
VMP1-205ENST00000587470 CUL5Q93034 780 aa5□□□□□ -1.61
VMP1-205ENST00000587470 COQ8BQ96D53 544 aa5□□□□□ -1.61
VMP1-205ENST00000587470 ZNF668Q96K58 619 aaPredicted RBP5□□□□□ -1.61
VMP1-205ENST00000587470 CHST8Q9H2A9 424 aa5□□□□□ -1.61
VMP1-205ENST00000587470 ZNF287Q9HBT7 754 aa5□□□□□ -1.61
VMP1-205ENST00000587470 TERF2IPQ9NYB0 399 aa5□□□□□ -1.61
VMP1-205ENST00000587470 DKK4Q9UBT3 224 aa5□□□□□ -1.61
VMP1-205ENST00000587470 AFG3L2Q9Y4W6 797 aa5□□□□□ -1.61
VMP1-205ENST00000587470 A0A1W2PP64 1363 aa5□□□□□ -1.61
VMP1-205ENST00000587470 ABCA3Q99758 1704 aa5□□□□□ -1.61
VMP1-205ENST00000587470 KIF7Q2M1P5 1343 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 TTC21AQ8NDW8 1320 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 ALS2Q96Q42 1657 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 A6NNZ2 444 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 A8MVJ9 347 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 RAB27BO00194 218 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 SOCS2O14508 198 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 FYB1O15117 783 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 KCNAB3O43448 404 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 MAP4K4O95819 1239 aaPredicted RBP4.99□□□□□ -1.61
VMP1-205ENST00000587470 PARP1P09874 1014 aaKnown RBP4.99□□□□□ -1.61
VMP1-205ENST00000587470 ACVR2AP27037 513 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 AWAT2Q6E213 333 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 DARS2Q6PI48 645 aaKnown RBP4.99□□□□□ -1.61
VMP1-205ENST00000587470 VSTM1Q6UX27 236 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 RANBP10Q6VN20 620 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 DCDC5Q6ZRR9 648 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 CCDC149Q6ZUS6 474 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 C16orf52Q8NHV5 167 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 MAFAQ8NHW3 353 aaPredicted RBP4.99□□□□□ -1.61
VMP1-205ENST00000587470 IPCEF1Q8WWN9 437 aaPredicted RBP4.99□□□□□ -1.61
VMP1-205ENST00000587470 WDYHV1Q96HA8 205 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 HS6ST2Q96MM7 605 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 TCEAL9Q9UHQ7 104 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms