RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 FAM208BQ5VWN6 2430 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 PTPRJQ12913 1337 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 CACNA1EQ15878 2313 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 THADAQ6YHU6 1953 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 GON4LQ3T8J9 2241 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 KIAA1549LQ6ZVL6 1849 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 A0A087X0T9 212 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 TRAV19A0A0A6YYK7 116 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 SGK1O00141 431 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 KHNYNO15037 678 aaKnown RBP8.22□□□□□ -1.09
VMP1-204ENST00000587259 PHACTR2O75167 634 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 KLF8O95600 359 aaPredicted RBP8.22□□□□□ -1.09
VMP1-204ENST00000587259 CYP17A1P05093 508 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 PDGFRBP09619 1106 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 USP17L7P0C7H9 530 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 TMEM191BP0C7N4 346 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 FAM228BP0C875 321 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 GZMAP12544 262 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 P4HA1P13674 534 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 TNFAIP3P21580 790 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 BDNFP23560 247 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 CACNA2D1P54289 1103 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 FAM193AP78312 1265 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 TSPY1Q01534 308 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 CYP27A1Q02318 531 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 KDSRQ06136 332 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 IFRD2Q12894 506 aaPredicted RBP8.22□□□□□ -1.09
VMP1-204ENST00000587259 ARHGAP44Q17R89 818 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 SOWAHAQ2M3V2 549 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 ZNF571Q7Z3V5 609 aaPredicted RBP8.22□□□□□ -1.09
VMP1-204ENST00000587259 RHOT2Q8IXI1 618 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 FAM71AQ8IYT1 594 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 ADGRF2Q8IZF7 708 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 TTC39CQ8N584 583 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 C2orf15Q8WU43 125 aaKnown RBP8.22□□□□□ -1.09
VMP1-204ENST00000587259 CTNNBL1Q8WYA6 563 aaPredicted RBP8.22□□□□□ -1.09
VMP1-204ENST00000587259 GATA6Q92908 595 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 ATP2A3Q93084 1043 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 ELMO3Q96BJ8 720 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 TRIM11Q96F44 468 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 MTMR12Q9C0I1 747 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 DNAI2Q9GZS0 605 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 RNF38Q9H0F5 515 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 ASB7Q9H672 318 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 KIF9Q9HAQ2 790 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 PDE11AQ9HCR9 933 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 TMEM9BQ9NQ34 198 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 CRTAC1Q9NQ79 661 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 TMEM30AQ9NV96 361 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 EBF1Q9UH73 591 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 KLK13Q9UKR3 277 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 NME7Q9Y5B8 376 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 SAR1BQ9Y6B6 198 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 PKD1L2Q7Z442 2459 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 NUP205Q92621 2012 aa8.22□□□□□ -1.09
VMP1-204ENST00000587259 ASCC3Q8N3C0 2202 aaKnown RBP8.21□□□□□ -1.09
VMP1-204ENST00000587259 MACROD2A1Z1Q3 448 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 ANKRD62A6NC57 917 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 SRRM3A6NNA2 597 aaPredicted RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 C3orf80F5H4A9 247 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 LEFTY2O00292 366 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 CES2O00748 559 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 TRIM24O15164 1050 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 ABL1P00519 1130 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 HLA-DRAP01903 254 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 C4BPAP04003 597 aaKnown RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 TMEM253P0C7T8 217 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 HDCP19113 662 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 DDX6P26196 483 aaKnown RBP eCLIP8.21□□□□□ -1.1
VMP1-204ENST00000587259 WASP42768 502 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 NAP1L1P55209 391 aaKnown RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 PRSS12P56730 875 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 NOP14P78316 857 aaKnown RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 TRPC3Q13507 836 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 NCOA4Q13772 614 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 ZNF268Q14587 947 aaPredicted RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 CRY1Q16526 586 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 SGSM1Q2NKQ1 1148 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 FBXO43Q4G163 708 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 USP39Q53GS9 565 aaKnown RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 TRIM61Q5EBN2 209 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 DAB2IPQ5VWQ8 1189 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 PAPD7Q5XG87 772 aaKnown RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 CCDC70Q6NSX1 233 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 RASSF3Q86WH2 238 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 SPATA2LQ8IUW3 424 aaPredicted RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 TXNDC5Q8NBS9 432 aaKnown RBP8.21□□□□□ -1.1
VMP1-204ENST00000587259 OR5B17Q8NGF7 314 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 PLEKHO2Q8TD55 490 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 TAS1R2Q8TE23 839 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 KBTBD7Q8WVZ9 684 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 HMGB4Q8WW32 186 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 RFFLQ8WZ73 363 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 UBXN4Q92575 508 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 GOLGA1Q92805 767 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 WBP2Q969T9 261 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 MYLPFQ96A32 169 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 ACDQ96AP0 544 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 ZNF560Q96MR9 790 aa8.21□□□□□ -1.1
VMP1-204ENST00000587259 AGPAT1Q99943 283 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms