RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 GOLGA6L7A0A1B0GV03 622 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 H0Y626 953 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 SYNCRIPO60506 623 aaKnown RBP12.16□□□□□ -0.46
LIG3-207ENST00000586119 GABBR2O75899 941 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 TRIM16O95361 564 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 CALCAP01258 141 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 KRT13P13646 458 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 HLA-FP30511 346 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 ACSL1P33121 698 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 PSMC2P35998 433 aaKnown RBP12.16□□□□□ -0.46
LIG3-207ENST00000586119 SYKP43405 635 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 CSNK1EP49674 416 aaKnown RBP12.16□□□□□ -0.46
LIG3-207ENST00000586119 PDE4CQ08493 712 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 SLC14A1Q13336 389 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
LIG3-207ENST00000586119 NFIL3Q16649 462 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 ZNF423Q2M1K9 1284 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 HLA-BQ31612 363 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 ARHGAP17Q68EM7 881 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 KRT39Q6A163 491 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 LAYNQ6UX15 382 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 RSRC2Q7L4I2 434 aaKnown RBP12.16□□□□□ -0.46
LIG3-207ENST00000586119 ANKS1BQ7Z6G8 1248 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 FMNL3Q8IVF7 1028 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 PRCCQ92733 491 aaPredicted RBP12.16□□□□□ -0.46
LIG3-207ENST00000586119 IMPG2Q9BZV3 1241 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 GOLPH3LQ9H4A5 285 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 C6orf106Q9H6K1 298 aaPredicted RBP12.16□□□□□ -0.46
LIG3-207ENST00000586119 SUSD2Q9UGT4 822 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 PCOLCE2Q9UKZ9 415 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 BTBD3Q9Y2F9 522 aa12.16□□□□□ -0.46
LIG3-207ENST00000586119 PIK3R2O00459 728 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 BCAT2O15382 392 aaPredicted RBP12.15□□□□□ -0.46
LIG3-207ENST00000586119 MSI1O43347 362 aaKnown RBP12.15□□□□□ -0.46
LIG3-207ENST00000586119 ZBED1O96006 694 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 ATXN1LP0C7T5 689 aaKnown RBP12.15□□□□□ -0.46
LIG3-207ENST00000586119 HOXD9P28356 352 aaPredicted RBP12.15□□□□□ -0.46
LIG3-207ENST00000586119 RDXP35241 583 aaKnown RBP12.15□□□□□ -0.46
LIG3-207ENST00000586119 MCCD1P59942 119 aaPredicted RBP12.15□□□□□ -0.46
LIG3-207ENST00000586119 GOLGA7BQ2TAP0 167 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 CBWD6Q4V339 395 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 ZCWPW2Q504Y3 356 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 CBWD3Q5JTY5 395 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 KCNT1Q5JUK3 1230 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 CBWD5Q5RIA9 395 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 PM20D1Q6GTS8 502 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
LIG3-207ENST00000586119 TADA2BQ86TJ2 420 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 PROSER1Q86XN7 944 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 FAM217AQ8IXS0 508 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 CPXM2Q8N436 756 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 GUF1Q8N442 669 aaKnown RBP12.15□□□□□ -0.46
LIG3-207ENST00000586119 ANKRD52Q8NB46 1076 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 CADM4Q8NFZ8 388 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 MDM1Q8TC05 714 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 WFDC5Q8TCV5 224 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 UCMAQ8WVF2 138 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 SPATA32Q96LK8 384 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 NUP58Q9BVL2 599 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 DCLK3Q9C098 648 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 TM7SF3Q9NS93 570 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 RAB20Q9NX57 234 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 TOR4AQ9NXH8 423 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 USP25Q9UHP3 1055 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 ASXL3Q9C0F0 2248 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 DOCK9Q9BZ29 2069 aa12.15□□□□□ -0.46
LIG3-207ENST00000586119 LAMA5O15230 3695 aa12.15□□□□□ -0.47
LIG3-207ENST00000586119 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
LIG3-207ENST00000586119 ACACAQ13085 2346 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 FAM237AA0A1B0GTK4 181 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 YJEFN3A6XGL0 299 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 E7ENQ6 273 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 IGLV3-19P01714 112 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 CYBBP04839 570 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 TRIM21P19474 475 aaKnown RBP12.14□□□□□ -0.47
LIG3-207ENST00000586119 MXI1P50539 228 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 LRMPQ12912 555 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 HNRNPDQ14103 355 aaKnown RBP12.14□□□□□ -0.47
LIG3-207ENST00000586119 PTPRNQ16849 979 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 KIF19Q2TAC6 998 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 BSPRYQ5W0U4 402 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 RFWD3Q6PCD5 774 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 SERPINA13PQ6UXR4 307 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 KRBA2Q6ZNG9 492 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 CHST9Q7L1S5 443 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 ADIPOR2Q86V24 386 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 OR2T3Q8NH03 318 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 SNX19Q92543 992 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 MYEOVQ96EZ4 313 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 TMEM245Q9H330 911 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 GDPD2Q9HCC8 539 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 PRSS16Q9NQE7 514 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 TSPAN16Q9UKR8 245 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 STRIP2Q9ULQ0 834 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.14□□□□□ -0.47
LIG3-207ENST00000586119 SNX11Q9Y5W9 270 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 KNTC1P50748 2209 aa12.14□□□□□ -0.47
LIG3-207ENST00000586119 TP53BP1Q12888 1972 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms