RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 USP17L7P0C7H9 530 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 BDNFP23560 247 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 IGFBP6P24592 240 aaPredicted RBP11.64□□□□□ -0.55
LIG3-204ENST00000585740 GBP2P32456 591 aaPredicted RBP11.64□□□□□ -0.55
LIG3-204ENST00000585740 STX2P32856 288 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 HTR7P34969 479 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 GLUD2P49448 558 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 SEC24CP53992 1094 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 GPX6P59796 221 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 YWHAHQ04917 246 aaPredicted RBP11.64□□□□□ -0.55
LIG3-204ENST00000585740 DSC1Q08554 894 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 NME3Q13232 169 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 DPYSQ14117 519 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 FASTKD3Q14CZ7 662 aaKnown RBP11.64□□□□□ -0.55
LIG3-204ENST00000585740 SYPL2Q5VXT5 272 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 LHX8Q68G74 356 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 C3orf62Q6ZUJ4 267 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 HFE2Q6ZVN8 426 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 UBE2Q1Q7Z7E8 422 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 CPLX4Q7Z7G2 160 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 TRABD2AQ86V40 505 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 SPATA2LQ8IUW3 424 aaPredicted RBP11.64□□□□□ -0.55
LIG3-204ENST00000585740 ANKMY2Q8IV38 441 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 MDM1Q8TC05 714 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 DYDC1Q8WWB3 177 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 HTR3CQ8WXA8 447 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 NDRG1Q92597 394 aaKnown RBP11.64□□□□□ -0.55
LIG3-204ENST00000585740 SGSM3Q96HU1 749 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 CYTH2Q99418 400 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 EPAS1Q99814 870 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 OSBPL7Q9BZF2 842 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 ZMYND15Q9H091 742 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 TRPV6Q9H1D0 765 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 ETNK1Q9HBU6 452 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 XAB2Q9HCS7 855 aaKnown RBP11.64□□□□□ -0.55
LIG3-204ENST00000585740 WDR6Q9NNW5 1121 aaKnown RBP11.64□□□□□ -0.55
LIG3-204ENST00000585740 SSU72Q9NP77 194 aaKnown RBP11.64□□□□□ -0.55
LIG3-204ENST00000585740 KCNK9Q9NPC2 374 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 PIGVQ9NUD9 493 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 TMEM161AQ9NX61 479 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 DTLQ9NZJ0 730 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 RABGEF1Q9UJ41 708 aa11.64□□□□□ -0.55
LIG3-204ENST00000585740 MYO16Q9Y6X6 1858 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 SYNJ2BP-COX16A0A087WUM0 186 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 A0A0A0MRY4 1105 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 A0A1W2PPC1 479 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 TCRBV7S3A2A0A539 114 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 TMEM120BA0PK00 339 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 RASA4BC9J798 803 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 TRDMT1O14717 391 aaKnown RBP11.63□□□□□ -0.55
LIG3-204ENST00000585740 SYN3O14994 580 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 PRPF4O43172 522 aaKnown RBP eCLIP11.63□□□□□ -0.55
LIG3-204ENST00000585740 MTSS1O43312 755 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 HOXA2O43364 376 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 RASA4O43374 803 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 MLNP12872 115 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 SELPP16109 830 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 MX2P20592 715 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 IBSPP21815 317 aaPredicted RBP11.63□□□□□ -0.55
LIG3-204ENST00000585740 DRD4P21917 467 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 GRK4P32298 578 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 SERPINB6P35237 376 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 MSH2P43246 934 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 GJA8P48165 433 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 CXCR3P49682 368 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 TPI1P60174 286 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 SLC10A2Q12908 348 aaPredicted RBP11.63□□□□□ -0.55
LIG3-204ENST00000585740 SEMA5AQ13591 1074 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 PRKD1Q15139 912 aaPredicted RBP11.63□□□□□ -0.55
LIG3-204ENST00000585740 NFE2Q16621 373 aaPredicted RBP11.63□□□□□ -0.55
LIG3-204ENST00000585740 BRMS1LQ5PSV4 323 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 GKAP1Q5VSY0 366 aaPredicted RBP11.63□□□□□ -0.55
LIG3-204ENST00000585740 FOXR1Q6PIV2 292 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 ADGRD1Q6QNK2 874 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 VSTM1Q6UX27 236 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 RFX8Q6ZV50 586 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 LRRC8DQ7L1W4 858 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 BHLHA9Q7RTU4 235 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 GPRIN1Q7Z2K8 1008 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 COLGALT2Q8IYK4 626 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 CCDC110Q8TBZ0 833 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 APBB2Q92870 758 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 ALKBH8Q96BT7 664 aaKnown RBP11.63□□□□□ -0.55
LIG3-204ENST00000585740 FUBP3Q96I24 572 aaKnown RBP eCLIP11.63□□□□□ -0.55
LIG3-204ENST00000585740 SPATA13Q96N96 652 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 SMC6Q96SB8 1091 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 KCNK16Q96T55 309 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 DHRS4Q9BTZ2 278 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 EIF2B3Q9NR50 452 aaKnown RBP11.63□□□□□ -0.55
LIG3-204ENST00000585740 DDIT4Q9NX09 232 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.63□□□□□ -0.55
LIG3-204ENST00000585740 COX16Q9P0S2 106 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 CTNNAL1Q9UBT7 734 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 TEX264Q9Y6I9 313 aa11.63□□□□□ -0.55
LIG3-204ENST00000585740 PLXNA3P51805 1871 aa11.62□□□□□ -0.55
LIG3-204ENST00000585740 IQANK1A0A1B0GTG1 560 aa11.62□□□□□ -0.55
LIG3-204ENST00000585740 FAM47DPA6NHR8 397 aa11.62□□□□□ -0.55
LIG3-204ENST00000585740 I3L4J1 428 aa11.62□□□□□ -0.55
LIG3-204ENST00000585740 TRIM66O15016 1216 aa11.62□□□□□ -0.55
LIG3-204ENST00000585740 DCLK1O15075 740 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms