RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 A0A0U1RQJ8 604 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 KCNU1A8MYU2 1149 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 H3BRJ5 948 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 ZFXP17010 805 aaPredicted RBP13.41□□□□□ -0.26
TRIM47-202ENST00000585333 HCAR3P49019 387 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 SLC25A11Q02978 314 aaKnown RBP13.41□□□□□ -0.26
TRIM47-202ENST00000585333 DPYSL2Q16555 572 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 DNTTIP2Q5QJE6 756 aaKnown RBP13.41□□□□□ -0.26
TRIM47-202ENST00000585333 RABGAP1LQ5R372 815 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 GET4Q7L5D6 327 aaPredicted RBP13.41□□□□□ -0.26
TRIM47-202ENST00000585333 CCDC117Q8IWD4 279 aaPredicted RBP13.41□□□□□ -0.26
TRIM47-202ENST00000585333 NPAS3Q8IXF0 933 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 ADAM32Q8TC27 787 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 ATRIPQ8WXE1 791 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 SMARCD2Q92925 531 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 NXPE3Q969Y0 559 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 FCRL2Q96LA5 508 aaPredicted RBP13.41□□□□□ -0.26
TRIM47-202ENST00000585333 ZNF670Q9BS34 389 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 MAK16Q9BXY0 300 aaKnown RBP13.41□□□□□ -0.26
TRIM47-202ENST00000585333 SLC46A2Q9BY10 475 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRIM47-202ENST00000585333 PCSK1NQ9UHG2 260 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 FZD10Q9ULW2 581 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 SAR1BQ9Y6B6 198 aa13.41□□□□□ -0.26
TRIM47-202ENST00000585333 FGF10O15520 208 aaPredicted RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 TBX18O95935 607 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 KRT1P04264 644 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 CEBPBP17676 345 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 L1CAMP32004 1257 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 PTPN7P35236 360 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 LTBRP36941 435 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 CCR2P41597 374 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 RBM10P98175 930 aaKnown RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 TFDP2Q14188 446 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 PPP2R5EQ16537 467 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 SLC5A9Q2M3M2 681 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 ZC3H12AQ5D1E8 599 aaKnown RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 OTUD1Q5VV17 481 aaPredicted RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 PAPD7Q5XG87 772 aaKnown RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 SYT10Q6XYQ8 523 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 HTR3DQ70Z44 454 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 BZW1Q7L1Q6 419 aaKnown RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 CCDC50Q8IVM0 306 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 ZSCAN18Q8TBC5 510 aaPredicted RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 SUSD6Q92537 303 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 FGF13Q92913 245 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 TCEAL4Q96EI5 215 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 GUCD1Q96NT3 240 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 SNRNP25Q9BV90 132 aaKnown RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 DHX35Q9H5Z1 703 aaKnown RBP13.4□□□□□ -0.26
TRIM47-202ENST00000585333 CATSPERBQ9H7T0 1116 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 ZFP14Q9HCL3 533 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 NUDT5Q9UKK9 219 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 SNX12Q9UMY4 172 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 CDH23Q9H251 3354 aa13.4□□□□□ -0.26
TRIM47-202ENST00000585333 LRRD1A4D1F6 860 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 F5H5T6 163 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 KCNK3O14649 394 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 DAPK3O43293 454 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 MSI1O43347 362 aaKnown RBP13.39□□□□□ -0.27
TRIM47-202ENST00000585333 ACSL4O60488 711 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 MOSPD3O75425 235 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 STC2O76061 302 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 CYBBP04839 570 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 RARAP10276 462 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 KCNA5P22460 613 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 CORO1AP31146 461 aaKnown RBP13.39□□□□□ -0.27
TRIM47-202ENST00000585333 GBP2P32456 591 aaPredicted RBP13.39□□□□□ -0.27
TRIM47-202ENST00000585333 SERPINB6P35237 376 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 GJC1P36383 396 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 PAFAH1B1P43034 410 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 PGFP49763 221 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 CDH6P55285 790 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 OXCT1P55809 520 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 NTHL1P78549 312 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 TFDP3Q5H9I0 405 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 ADGRF1Q5T601 910 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 CCDC181Q5TID7 509 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 Q7L0L9 218 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 ARID3BQ8IVW6 561 aaPredicted RBP13.39□□□□□ -0.27
TRIM47-202ENST00000585333 C17orf53Q8N3J3 647 aaPredicted RBP13.39□□□□□ -0.27
TRIM47-202ENST00000585333 ITFG1Q8TB96 612 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 SH3RF2Q8TEC5 729 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 DEPDC1BQ8WUY9 529 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 HSPH1Q92598 858 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 ASB16Q96NS5 453 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 TLR10Q9BXR5 811 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 RNF38Q9H0F5 515 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 HOMER3Q9NSC5 361 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 OR12D3Q9UGF7 316 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 STOML2Q9UJZ1 356 aa13.39□□□□□ -0.27
TRIM47-202ENST00000585333 USP15Q9Y4E8 981 aaPredicted RBP13.39□□□□□ -0.27
TRIM47-202ENST00000585333 CHD7Q9P2D1 2997 aa13.38□□□□□ -0.27
TRIM47-202ENST00000585333 TRANK1O15050 2925 aa13.38□□□□□ -0.27
TRIM47-202ENST00000585333 GOLGA6L10A0A0M3HER8 536 aa13.38□□□□□ -0.27
TRIM47-202ENST00000585333 LEFTY2O00292 366 aa13.38□□□□□ -0.27
TRIM47-202ENST00000585333 PAGE1O75459 146 aa13.38□□□□□ -0.27
TRIM47-202ENST00000585333 TJP3O95049 919 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms