RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MRPS5P82675 430 aaKnown RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 FAAP100Q0VG06 881 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 TFDP2Q14188 446 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 PTPRCAPQ14761 206 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 TAC4Q86UU9 113 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 SERINC5Q86VE9 423 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 LINC01465Q8N7H1 131 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 MCUQ8NE86 351 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 CXorf38Q8TB03 319 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 DUSP16Q9BY84 665 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 GMIPQ9P107 970 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 STAP1Q9ULZ2 295 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 CXorf49A8MYA2 514 aaPredicted RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 PIRO00625 290 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 RPA3P35244 121 aaPredicted RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 CPA2P48052 419 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 ALDH7A1P49419 539 aaKnown RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 ZBTB16Q05516 673 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 TRIM60Q495X7 471 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 CERCAMQ5T4B2 595 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 SPRED2Q7Z698 418 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 ZMIZ2Q8NF64 920 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 MORC4Q8TE76 937 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 RPRD1AQ96P16 312 aaPredicted RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 CAB39LQ9H9S4 337 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 NMUR1Q9HB89 426 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 TMEM39AQ9NV64 488 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 TRIM33Q9UPN9 1127 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 ANKRD12Q6UB98 2062 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 EIF3HO15372 352 aaKnown RBP eCLIP10.62□□□□□ -0.71
RFFL-212ENST00000584655 ADAMTS4O75173 837 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 MT-ND3P03897 115 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 RARGP13631 454 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 INHBEP58166 350 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 CLLU1OSQ5K130 101 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 ALLCQ8N6M5 410 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 PQLC3Q8N755 202 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 ZNF473Q8WTR7 871 aaKnown RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 MAIP1Q8WWC4 291 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 FBXO32Q969P5 355 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 PAWRQ96IZ0 340 aaKnown RBP10.62□□□□□ -0.71
RFFL-212ENST00000584655 ADAM7Q9H2U9 754 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 EPB41L4BQ9H329 900 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 ZNF358Q9NW07 568 aa10.62□□□□□ -0.71
RFFL-212ENST00000584655 I6L893 689 aaPredicted RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 DNALI1O14645 258 aaPredicted RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 CAPN15O75808 1086 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 PYGBP11216 843 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 ADRA1DP25100 572 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 CSE1LP55060 971 aaKnown RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 TCEA2Q15560 299 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 LINGO4Q6UY18 593 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 ART4Q93070 314 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 TGS1Q96RS0 853 aaKnown RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 SMC6Q96SB8 1091 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 BRD8Q9H0E9 1235 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 CCSER2Q9H7U1 834 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 DDX56Q9NY93 547 aaKnown RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 DTLQ9NZJ0 730 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 SLC17A7Q9P2U7 560 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 TRIM49D1C9J1S8 452 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 PRRG1O14668 218 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 ALDH2P05091 517 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 TAF10Q12962 218 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 KLF1Q13351 362 aaPredicted RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 LRRC73Q5JTD7 316 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 TPGS1Q6ZTW0 290 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 RAPH1Q70E73 1250 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 CMC1Q7Z7K0 106 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 ECHDC2Q86YB7 292 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 CASP10Q92851 521 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 ZNF669Q96BR6 464 aaPredicted RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 P2RY11Q96G91 374 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 ZNF778Q96MU6 729 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 PAFAH2Q99487 392 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 CNTN3Q9P232 1028 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 WDR35Q9P2L0 1181 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 HMGB1P1B2RPK0 211 aaPredicted RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 LRIG2O94898 1065 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 PCSK1P29120 753 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 TUBP50607 506 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 KCNQ1P51787 676 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 ATXN3P54252 364 aaPredicted RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 RCN2Q14257 317 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 DLG2Q15700 870 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 PPM1JQ5JR12 505 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 ZNF598Q86UK7 904 aaKnown RBP10.61□□□□□ -0.71
RFFL-212ENST00000584655 ARMC2Q8NEN0 867 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 OR6P1Q8NGX9 317 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 TTC8Q8TAM2 541 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 MYCBPAPQ8TBZ2 947 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 URGCPQ8TCY9 931 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 MAML1Q92585 1016 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 MCRS1Q96EZ8 462 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 NPHS2Q9NP85 383 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 TLR9Q9NR96 1032 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 PCDHGC3Q9UN70 934 aa10.61□□□□□ -0.71
RFFL-212ENST00000584655 RBM47A0AV96 593 aaKnown RBP10.6□□□□□ -0.71
RFFL-212ENST00000584655 IVDP26440 423 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms