RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 KIAA1614Q5VZ46 1190 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 SMYD4Q8IYR2 804 aaPredicted RBP11.73□□□□□ -0.53
CCDC47-206ENST00000584112 ADGRG2Q8IZP9 1017 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 C12orf29Q8N999 325 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 TAS1R2Q8TE23 839 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 FGF11Q92914 225 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 TMEM176AQ96HP8 235 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 CNOT6LQ96LI5 555 aaKnown RBP11.73□□□□□ -0.53
CCDC47-206ENST00000584112 SMOQ99835 787 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 NACA2Q9H009 215 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 FAM124BQ9H5Z6 455 aaPredicted RBP11.73□□□□□ -0.53
CCDC47-206ENST00000584112 IL21RQ9HBE5 538 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 PNPLA8Q9NP80 782 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 TLR8Q9NR97 1041 aaKnown RBP11.73□□□□□ -0.53
CCDC47-206ENST00000584112 FAM49BQ9NUQ9 324 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 GMIPQ9P107 970 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 CHORDC1Q9UHD1 332 aaPredicted RBP11.73□□□□□ -0.53
CCDC47-206ENST00000584112 SH3BP1Q9Y3L3 701 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 MTORP42345 2549 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 CLEC18AA5D8T8 446 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.72□□□□□ -0.53
CCDC47-206ENST00000584112 SLC16A3O15427 465 aaKnown RBP11.72□□□□□ -0.53
CCDC47-206ENST00000584112 CILPO75339 1184 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 ZDHHC11BP0C7U3 371 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 ADH5P11766 374 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 HNRNPLP14866 589 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCDC47-206ENST00000584112 HOXD12P35452 270 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 OPRD1P41143 372 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 DHCR24Q15392 516 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 CLEC18BQ6UXF7 455 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 CLEC20AQ6ZU45 233 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 CLEC18CQ8NCF0 446 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 FBXL13Q8NEE6 735 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 ZMIZ2Q8NF64 920 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 CYFIP2Q96F07 1278 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 TIGD1Q96MW7 591 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 DUSP9Q99956 384 aaKnown RBP11.72□□□□□ -0.53
CCDC47-206ENST00000584112 CCSER2Q9H7U1 834 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 APOBEC3GQ9HC16 384 aaKnown RBP11.72□□□□□ -0.53
CCDC47-206ENST00000584112 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.536e-6■■■□□ 15
CCDC47-206ENST00000584112 PCDHA5Q9Y5H7 936 aa11.72□□□□□ -0.53
CCDC47-206ENST00000584112 TLR5O60602 858 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 BEST1O76090 585 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 APODP05090 189 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 CD58P19256 250 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 ELAVL4P26378 380 aaKnown RBP11.71□□□□□ -0.53
CCDC47-206ENST00000584112 PRCPP42785 496 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 TMPRSS3P57727 454 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 FKBP3Q00688 224 aaKnown RBP11.71□□□□□ -0.53
CCDC47-206ENST00000584112 LRRC63Q05C16 580 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 GOLGA8FQ08AF8 430 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 GOLGA8DPQ0D2H9 430 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 STIM1Q13586 685 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 EXD3Q8N9H8 876 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 ENGASEQ8NFI3 743 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 TSC1Q92574 1164 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 SMARCE1Q969G3 411 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 ZFRQ96KR1 1074 aaKnown RBP11.71□□□□□ -0.53
CCDC47-206ENST00000584112 TWNKQ96RR1 684 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 PNKPQ96T60 521 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 LGMNQ99538 433 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCDC47-206ENST00000584112 RAB20Q9NX57 234 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 SCML2Q9UQR0 700 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 BTBD3Q9Y2F9 522 aa11.71□□□□□ -0.53
CCDC47-206ENST00000584112 SCAMP3O14828 347 aaKnown RBP11.7□□□□□ -0.54
CCDC47-206ENST00000584112 SUV39H1O43463 412 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 BRINP1O60477 761 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 ACO1P21399 889 aaKnown RBP11.7□□□□□ -0.54
CCDC47-206ENST00000584112 ATP5C1P36542 298 aaKnown RBP11.7□□□□□ -0.54
CCDC47-206ENST00000584112 PPP1R2P41236 205 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 DPP6P42658 865 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 PSEN1P49768 467 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 MRPS21P82921 87 aaKnown RBP11.7□□□□□ -0.54
CCDC47-206ENST00000584112 GAD2Q05329 585 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 GAB4Q2WGN9 574 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 PLEKHG6Q3KR16 790 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 HSF5Q4G112 596 aaPredicted RBP11.7□□□□□ -0.54
CCDC47-206ENST00000584112 DCAF17Q5H9S7 520 aaPredicted RBP11.7□□□□□ -0.54
CCDC47-206ENST00000584112 C6orf118Q5T5N4 469 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 TCERG1LQ5VWI1 586 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 BTBD8Q5XKL5 378 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 RHBDF2Q6PJF5 856 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 TADA2BQ86TJ2 420 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 ERICH1Q86X53 443 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 SPATA20Q8TB22 786 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 USP33Q8TEY7 942 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 JAKMIP2Q96AA8 810 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 EEF2KMTQ96G04 330 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 SPACA7Q96KW9 195 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 DUSP16Q9BY84 665 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 LRRC4CQ9HCJ2 640 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 SEPT3Q9UH03 358 aa11.7□□□□□ -0.54
CCDC47-206ENST00000584112 LSM7Q9UK45 103 aaKnown RBP11.7□□□□□ -0.54
CCDC47-206ENST00000584112 PDZD2O15018 2839 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 HHLA1C9JL84 531 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 K7EQS6 105 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 PSMA7O14818 248 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms