RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 SLC14A1Q13336 389 aa21.49■■□□□ 1.03
SRSF1-206ENST00000583741 HNRNPDQ14103 355 aaKnown RBP21.49■■□□□ 1.03
SRSF1-206ENST00000583741 TRIP6Q15654 476 aaKnown RBP21.49■■□□□ 1.03
SRSF1-206ENST00000583741 SGSM1Q2NKQ1 1148 aa21.49■■□□□ 1.03
SRSF1-206ENST00000583741 CEP135Q66GS9 1140 aa21.49■■□□□ 1.03
SRSF1-206ENST00000583741 UNC93AQ86WB7 457 aa21.49■■□□□ 1.03
SRSF1-206ENST00000583741 PROSER1Q86XN7 944 aa21.49■■□□□ 1.03
SRSF1-206ENST00000583741 FAM124BQ9H5Z6 455 aaPredicted RBP21.49■■□□□ 1.03
SRSF1-206ENST00000583741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.49■■□□□ 1.033e-6■■■□□ 19.1
SRSF1-206ENST00000583741 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.49■■□□□ 1.03
SRSF1-206ENST00000583741 ADAMTS20P59510 1910 aa21.49■■□□□ 1.03
SRSF1-206ENST00000583741 CKAP5Q14008 2032 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 GFRA2O00451 464 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 ASS1P00966 412 aaKnown RBP21.48■■□□□ 1.03
SRSF1-206ENST00000583741 EPB41P11171 864 aaKnown RBP21.48■■□□□ 1.03
SRSF1-206ENST00000583741 RARGP13631 454 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 ACO1P21399 889 aaKnown RBP21.48■■□□□ 1.03
SRSF1-206ENST00000583741 MTIF2P46199 727 aaKnown RBP21.48■■□□□ 1.03
SRSF1-206ENST00000583741 UBASH3AP57075 661 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 FUT11Q495W5 492 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 SYCP2LQ5T4T6 812 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 KLHDC10Q6PID8 442 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 NAXDQ8IW45 347 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 HNRNPABQ99729 332 aaKnown RBP21.48■■□□□ 1.03
SRSF1-206ENST00000583741 XPO4Q9C0E2 1151 aaKnown RBP21.48■■□□□ 1.03
SRSF1-206ENST00000583741 MKRN2Q9H000 416 aaKnown RBP21.48■■□□□ 1.03
SRSF1-206ENST00000583741 SUSD2Q9UGT4 822 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 FBXO10Q9UK96 956 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 FRMD4BQ9Y2L6 1034 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 STON1Q9Y6Q2 735 aa21.48■■□□□ 1.03
SRSF1-206ENST00000583741 PTPRBP23467 1997 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 CBFA2T2O43439 604 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 STC2O76061 302 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 FTH1P19P0C7X4 201 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 CD6P30203 668 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 PSMC2P35998 433 aaKnown RBP21.47■■□□□ 1.03
SRSF1-206ENST00000583741 ZNF75DP51815 510 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 C10orf120Q5SQS8 335 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 C1orf220Q5T0J3 134 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 SV2AQ7L0J3 742 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 APTXQ7Z2E3 356 aaKnown RBP21.47■■□□□ 1.03
SRSF1-206ENST00000583741 PNPLA1Q8N8W4 532 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 FOXJ1Q92949 421 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 TOE1Q96GM8 510 aaKnown RBP21.47■■□□□ 1.03
SRSF1-206ENST00000583741 TAB2Q9NYJ8 693 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 DNMT3LQ9UJW3 386 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 APC2O95996 2303 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 ACACAQ13085 2346 aa21.47■■□□□ 1.03
SRSF1-206ENST00000583741 KLKB1P03952 638 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 TPM3P06753 285 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 TPM2P07951 284 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 PRKCSHP14314 528 aaPredicted RBP21.46■■□□□ 1.03
SRSF1-206ENST00000583741 GNSP15586 552 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 PLA2G4AP47712 749 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 COPB1P53618 953 aaKnown RBP21.46■■□□□ 1.03
SRSF1-206ENST00000583741 MARSP56192 900 aaKnown RBP21.46■■□□□ 1.03
SRSF1-206ENST00000583741 INCA1Q0VD86 236 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 SCAPQ12770 1279 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 FILIP1LQ4L180 1135 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 WDR45BQ5MNZ6 344 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 SCD5Q86SK9 330 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 ADAMTS14Q8WXS8 1223 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 TAF4BQ92750 862 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 CYFIP2Q96F07 1278 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 TUBGCP2Q9BSJ2 902 aa21.46■■□□□ 1.03
SRSF1-206ENST00000583741 WSB2Q9NYS7 404 aaPredicted RBP21.46■■□□□ 1.03
SRSF1-206ENST00000583741 USP36Q9P275 1121 aaKnown RBP21.46■■□□□ 1.03
SRSF1-206ENST00000583741 ARMCX3Q9UH62 379 aaPredicted RBP21.46■■□□□ 1.03
SRSF1-206ENST00000583741 A0A1B0GTH6 734 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 LRRC10BA6NIK2 292 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 PENKP01210 267 aaPredicted RBP21.45■■□□□ 1.03
SRSF1-206ENST00000583741 HLA-DRAP01903 254 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 IL12RB1P42701 662 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 KIF11P52732 1056 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 MFAP3P55082 362 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 STARD3Q14849 445 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 GEN1Q17RS7 908 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 FYB2Q5VWT5 728 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 METTL3Q86U44 580 aaKnown RBP21.45■■□□□ 1.03
SRSF1-206ENST00000583741 FAM186BQ8IYM0 893 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 ZCCHC9Q8N567 271 aaKnown RBP21.45■■□□□ 1.03
SRSF1-206ENST00000583741 KNL1Q8NG31 2342 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 DNASE2BQ8WZ79 361 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 MRFAP1L1Q96HT8 127 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 NAP1L5Q96NT1 182 aaPredicted RBP21.45■■□□□ 1.03
SRSF1-206ENST00000583741 GPR174Q9BXC1 333 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 VPS16Q9H269 839 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 PRDM16Q9HAZ2 1276 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 METTL14Q9HCE5 456 aaKnown RBP21.45■■□□□ 1.03
SRSF1-206ENST00000583741 PNPLA8Q9NP80 782 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 NAGPAQ9UK23 515 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 SLC27A6Q9Y2P4 619 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 PCDHB9Q9Y5E1 797 aa21.45■■□□□ 1.03
SRSF1-206ENST00000583741 MEI4A8MW99 385 aa21.45■■□□□ 1.02
SRSF1-206ENST00000583741 CBFA2T3O75081 653 aa21.45■■□□□ 1.02
SRSF1-206ENST00000583741 PIK3CAP42336 1068 aa21.45■■□□□ 1.02
SRSF1-206ENST00000583741 ENPP2Q13822 863 aa21.45■■□□□ 1.02
SRSF1-206ENST00000583741 ACAP1Q15027 740 aa21.45■■□□□ 1.02
SRSF1-206ENST00000583741 MAN2A1Q16706 1144 aa21.45■■□□□ 1.02
SRSF1-206ENST00000583741 TMC2Q8TDI7 906 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms