RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ATMIN	O43313	823 aa	Predicted RBP	5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	RAD1	O60671	282 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	RECK	O95980	971 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	HDC	P19113	662 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	AARS	P49588	968 aa	Known RBP eCLIP	5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	CDK18	Q07002	472 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	SMARCB1	Q12824	385 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	SEMA5A	Q13591	1074 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	DSG2	Q14126	1118 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	NR0B2	Q15466	257 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	ALX1	Q15699	326 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	MTFR2	Q6P444	385 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	CRTC1	Q6UUV9	634 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	C16orf47	Q6ZP98	133 aa	Predicted RBP	5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	FERMT3	Q86UX7	667 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	RAB11FIP4	Q86YS3	637 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	PARP9	Q8IXQ6	854 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	EXOC8	Q8IYI6	725 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	ADGRF2	Q8IZF7	708 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	SRBD1	Q8N5C6	995 aa	Known RBP	5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	RBMXL3	Q8N7X1	1067 aa	Known RBP	5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	NAT16	Q8N8M0	369 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	TTC16	Q8NEE8	873 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	SPPL2B	Q8TCT7	592 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	ROBO4	Q8WZ75	1007 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	NRGN	Q92686	78 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	PTPRN2	Q92932	1015 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	SERAC1	Q96JX3	654 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	TMEM121	Q9BTD3	319 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	BOC	Q9BWV1	1114 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	FOXP3	Q9BZS1	431 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	DHX33	Q9H6R0	707 aa	Known RBP	5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	TRPC7	Q9HCX4	862 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	TOMM22	Q9NS69	142 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	SLC38A7	Q9NVC3	462 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	TRPS1	Q9UHF7	1281 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	GGT7	Q9UJ14	662 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	PILRA	Q9UKJ1	303 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	SALL2	Q9Y467	1007 aa	Predicted RBP	5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	ZNF451	Q9Y4E5	1061 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	NUB1	Q9Y5A7	615 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	CSNK1G3	Q9Y6M4	447 aa		5.3	□□□□□ -1.56
MSI2-216	ENST00000582772	TPP1	O14773	563 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	B4GALT5	O43286	388 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	PHACTR2	O75167	634 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	DNAJB5	O75953	348 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	HAPLN1	P10915	354 aa	Predicted RBP	5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	EDN3	P14138	238 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	IGFBP2	P18065	325 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	EGR1	P18146	543 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	MAP4	P27816	1152 aa	Known RBP	5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	NUDT1	P36639	197 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	MAPK10	P53779	464 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	GALC	P54803	685 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	CSNK1G2	P78368	415 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	ABHD18	Q0P651	414 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	DMP1	Q13316	513 aa	Predicted RBP	5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	MGAT5B	Q3V5L5	792 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	TTC31	Q49AM3	519 aa	Predicted RBP	5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	GLRA4	Q5JXX5	417 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	IQCA1	Q86XH1	822 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	CACUL1	Q86Y37	369 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	FSIP1	Q8NA03	581 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	OR2T34	Q8NGX1	318 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	SGMS2	Q8NHU3	365 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	EXOC6	Q8TAG9	804 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	GIPC2	Q8TF65	315 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	CCDC120	Q96HB5	630 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	LCOR	Q96JN0	433 aa	Predicted RBP	5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	GFM1	Q96RP9	751 aa	Known RBP	5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	SLC25A23	Q9BV35	468 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	DDA1	Q9BW61	102 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	SPRY4	Q9C004	299 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	PSTPIP2	Q9H939	334 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	MRPL40	Q9NQ50	206 aa	Known RBP	5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	DNAJC17	Q9NVM6	304 aa	Known RBP	5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	MARK1	Q9P0L2	795 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	LUZP4	Q9P127	313 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	TENM3	Q9P273	2699 aa		5.29	□□□□□ -1.56
MSI2-216	ENST00000582772	LOC101059948	A0A1B0GTJ6	334 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	SMIM28	A0A1B0GU29	152 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	FRMD3	A2A2Y4	597 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	TTLL13P	A6NNM8	815 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	INO80B-WBP1	J3KQ70	363 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	PROM1	O43490	865 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	CEACAM4	O75871	244 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	CISD3	P0C7P0	127 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	MCM4	P33991	863 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	RPIA	P49247	311 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	SET	Q01105	290 aa	Predicted RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	NRG1	Q02297	640 aa	Predicted RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772		Q0VFX4	171 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	KCNMA1	Q12791	1236 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	MXD4	Q14582	209 aa	Predicted RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	CHRNA6	Q15825	494 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	NCEH1	Q6PIU2	408 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	ALKAL1	Q6UXT8	129 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	LINGO4	Q6UY18	593 aa		5.28	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms