RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 TM9SF3Q9HD45 589 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 TMEM30AQ9NV96 361 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 PLK2Q9NYY3 685 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 SLCO1B1Q9Y6L6 691 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 PTPRJQ12913 1337 aa11.31□□□□□ -0.6
TOP3A-210ENST00000580713 PVALEFA0A1B0GWK0 134 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 ERVH48-1M5A8F1 160 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 PCDHGA12O60330 932 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 TLR5O60602 858 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 RFPL3O75679 317 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 LDOC1O95751 146 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-210ENST00000580713 CISD3P0C7P0 127 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 IDEP14735 1019 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 IL12RB1P42701 662 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 ZNF132P52740 706 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 CDH8P55286 799 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 GOLGA8FQ08AF8 430 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 KCNA1Q09470 495 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 GOLGA8DPQ0D2H9 430 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 ORC1Q13415 861 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 ANO6Q4KMQ2 910 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 HES3Q5TGS1 186 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 PCSK4Q6UW60 755 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 LIMS2Q7Z4I7 341 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 GAS2L3Q86XJ1 694 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 LURAP1LQ8IV03 231 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 FAM181AQ8N9Y4 354 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 SNIP1Q8TAD8 396 aaKnown RBP11.3□□□□□ -0.6
TOP3A-210ENST00000580713 DNAJC19Q96DA6 116 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 LGMNQ99538 433 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 DUSP9Q99956 384 aaKnown RBP11.3□□□□□ -0.6
TOP3A-210ENST00000580713 MED10Q9BTT4 135 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 B3GNT5Q9BYG0 378 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 NRSN2Q9GZP1 204 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 PCED1AQ9H1Q7 454 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 DPEP3Q9H4B8 488 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 C6orf106Q9H6K1 298 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-210ENST00000580713 MRPL44Q9H9J2 332 aaKnown RBP11.3□□□□□ -0.6
TOP3A-210ENST00000580713 EXOC1Q9NV70 894 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 INTS13Q9NVM9 706 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 MARK1Q9P0L2 795 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 TBC1D7Q9P0N9 293 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 PCDHGA1Q9Y5H4 931 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 ATP8B3O60423 1300 aa11.3□□□□□ -0.6
TOP3A-210ENST00000580713 MUC22E2RYF6 1773 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-210ENST00000580713 A8MXQ7 604 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 CBX4O00257 560 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 NPC1O15118 1278 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 BRINP1O60477 761 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 RHOBTB3O94955 611 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 FSBPO95073 299 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 GCNT3O95395 438 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 TBX18O95935 607 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 CDK4P11802 303 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 GARTP22102 1010 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 ACTN2P35609 894 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 GRIA4P48058 902 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 TUBP50607 506 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 SLC5A3P53794 718 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 C21orf59P57076 290 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 TLE3Q04726 772 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 KCNH2Q12809 1159 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 DNAJC3Q13217 504 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 RTP5Q14D33 572 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 DUOXA2Q1HG44 320 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 DPCR1Q3MIW9 517 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 L1TD1Q5T7N2 865 aaKnown RBP11.29□□□□□ -0.6
TOP3A-210ENST00000580713 DMRTA1Q5VZB9 504 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 GATAD2AQ86YP4 633 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 SPACA3Q8IXA5 215 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 OR5B17Q8NGF7 314 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 NAF1Q96HR8 494 aaKnown RBP11.29□□□□□ -0.6
TOP3A-210ENST00000580713 CNDP2Q96KP4 475 aaKnown RBP11.29□□□□□ -0.6
TOP3A-210ENST00000580713 KCNK16Q96T55 309 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 CBWD1Q9BRT8 395 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 GTPBP4Q9BZE4 634 aaKnown RBP11.29□□□□□ -0.6
TOP3A-210ENST00000580713 NAT10Q9H0A0 1025 aaKnown RBP11.29□□□□□ -0.6
TOP3A-210ENST00000580713 PANK4Q9NVE7 773 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 THAP10Q9P2Z0 257 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-210ENST00000580713 DACH1Q9UI36 760 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 COL6A6A6NMZ7 2263 aa11.29□□□□□ -0.6
TOP3A-210ENST00000580713 FRMD3A2A2Y4 597 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 B8ZZF3 427 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 DFNA5O60443 496 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 IGLV3-19P01714 112 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 ITGAVP06756 1048 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 EPHX1P07099 455 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 C1SP09871 688 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 ABCB4P21439 1286 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 BMP6P22004 513 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 ACSL1P33121 698 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 TNNC1P63316 161 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 RHDQ02161 417 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 ARID5AQ03989 594 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 E2F5Q15329 346 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 PRAMEF14Q5SWL7 426 aa11.28□□□□□ -0.6
TOP3A-210ENST00000580713 ZNF658Q5TYW1 1059 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms