RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 PLEKHA5Q9HAU0 1116 aa6.39□□□□□ -1.39
KPNB1-209ENST00000580158 CD248Q9HCU0 757 aa6.39□□□□□ -1.39
KPNB1-209ENST00000580158 ASCL3Q9NQ33 180 aa6.39□□□□□ -1.39
KPNB1-209ENST00000580158 TRPM5Q9NZQ8 1165 aa6.39□□□□□ -1.39
KPNB1-209ENST00000580158 VPS54Q9P1Q0 977 aa6.39□□□□□ -1.39
KPNB1-209ENST00000580158 RCAN3Q9UKA8 241 aa6.39□□□□□ -1.39
KPNB1-209ENST00000580158 PCDHA4Q9UN74 947 aa6.39□□□□□ -1.39
KPNB1-209ENST00000580158 ITPR2Q14571 2701 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 KLF18A0A0U1RQI7 1052 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 VPS37CA5D8V6 355 aaPredicted RBP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 CCNT1O60563 726 aaKnown RBP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 AGFG2O95081 481 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 CD27P26842 260 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 GRIK1P39086 918 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 CASRP41180 1078 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 GPR15P49685 360 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 SLC7A9P82251 487 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 DAB2P98082 770 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 ZXDBP98169 803 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 MYL7Q01449 175 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 E2F5Q15329 346 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 DDR2Q16832 855 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 SKIDA1Q1XH10 827 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 FUT11Q495W5 492 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 HS1BP3Q53T59 392 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 PRAMEF14Q5SWL7 426 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 SDHAF4Q5VUM1 108 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 B4GALNT3Q6L9W6 998 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 IGF2-ASQ6U949 168 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 MPZL3Q6UWV2 235 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 LAYNQ6UX15 382 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 SND1Q7KZF4 910 aaKnown RBP eCLIP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 FAM124AQ86V42 546 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 LRRTM3Q86VH5 581 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 PTRH1Q86Y79 214 aaKnown RBP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 TMPRSS6Q8IU80 811 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 TICAM1Q8IUC6 712 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 ETFBKMTQ8IXQ9 262 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 SRRM1Q8IYB3 904 aaKnown RBP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 BLIDQ8IZY5 108 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 ZNF564Q8TBZ8 553 aaPredicted RBP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 SCG3Q8WXD2 468 aaKnown RBP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 BSNDQ8WZ55 320 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 HSD17B14Q9BPX1 270 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 PTPRHQ9HD43 1115 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 DNAJC17Q9NVM6 304 aaKnown RBP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 GEMIN8Q9NWZ8 242 aaKnown RBP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 ANAPC2Q9UJX6 822 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 BRPF3Q9ULD4 1205 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 PCDHA12Q9UN75 941 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.38□□□□□ -1.39
KPNB1-209ENST00000580158 CPQQ9Y646 472 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 MED13LQ71F56 2210 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 BOD1L1Q8NFC6 3051 aa6.38□□□□□ -1.39
KPNB1-209ENST00000580158 UTP20O75691 2785 aaKnown RBP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 POLQO75417 2590 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 SVILO95425 2214 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 A0A087WWV3 80 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 CCDC169A6NNP5 214 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 WASH3PC4AMC7 463 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 CYB561D2O14569 222 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 SCAMP3O14828 347 aaKnown RBP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 NPC1O15118 1278 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 VILLO15195 856 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 CYP26A1O43174 497 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 HOXC11O43248 304 aaPredicted RBP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 CSO75390 466 aaKnown RBP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 ABL1P00519 1130 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 IGLV3-19P01714 112 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 EPB42P16452 691 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 MATR3P43243 847 aaKnown RBP eCLIP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 PPP3CCP48454 512 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 BCAT1P54687 386 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 OXCT1P55809 520 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 RACK1P63244 317 aaKnown RBP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 PPP2R3AQ06190 1150 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 SPAG1Q07617 926 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 SAFBQ15424 915 aaKnown RBP eCLIP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 C3orf38Q5JPI3 329 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 KCNT1Q5JUK3 1230 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 FHL5Q5TD97 284 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 GALNT17Q6IS24 598 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 NEK8Q86SG6 692 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 SCN4BQ8IWT1 228 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 ARL14Q8N4G2 192 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 OXR1Q8N573 874 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 HAS1Q92839 578 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 BIRC7Q96CA5 298 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 SLC46A1Q96NT5 459 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 TSPAN18Q96SJ8 248 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 KIFC3Q9BVG8 833 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 TARS2Q9BW92 718 aaKnown RBP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 SLC26A6Q9BXS9 759 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 RNF26Q9BY78 433 aaPredicted RBP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 MKRN2Q9H000 416 aaKnown RBP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 ABCG4Q9H172 646 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 ADNPQ9H2P0 1102 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 C6orf106Q9H6K1 298 aaPredicted RBP6.37□□□□□ -1.39
KPNB1-209ENST00000580158 ABCB6Q9NP58 842 aa6.37□□□□□ -1.39
KPNB1-209ENST00000580158 GDF3Q9NR23 364 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms