RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 CD93Q9NPY3 652 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 ELOVL2Q9NXB9 296 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 WSB2Q9NYS7 404 aaPredicted RBP13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 USP36Q9P275 1121 aaKnown RBP13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 CTNND2Q9UQB3 1225 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 COQ4Q9Y3A0 265 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 NEUROG3Q9Y4Z2 214 aa13.15□□□□□ -0.3
SMARCD2-207ENST00000578234 AKAP13Q12802 2813 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 SLC12A8A0AV02 714 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 TIMM44O43615 452 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 SYNCRIPO60506 623 aaKnown RBP13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 GJB3O75712 270 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 ZBED1O96006 694 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 EPB41P11171 864 aaKnown RBP13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 CD59P13987 128 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 IL12RB1P42701 662 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 PMS1P54277 932 aaKnown RBP13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 STX17P56962 302 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 STIM1Q13586 685 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 ANKS1BQ7Z6G8 1248 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 DNASE2BQ8WZ79 361 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 TATDN2Q93075 761 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 PLD4Q96BZ4 506 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 TOE1Q96GM8 510 aaKnown RBP13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 CAMK1GQ96NX5 476 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 ZDHHC5Q9C0B5 715 aa13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 OLA1Q9NTK5 396 aaKnown RBP13.14□□□□□ -0.31
SMARCD2-207ENST00000578234 GOLGA8CPA6NN73 597 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 SRRM3A6NNA2 597 aaPredicted RBP13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 H0Y626 953 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 XPO1O14980 1071 aaKnown RBP13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 SH3BP5O60239 455 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 TRIM16O95361 564 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 OXTRP30559 389 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 BCAT1P54687 386 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 FAM193AP78312 1265 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 PDE4CQ08493 712 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 COL9A2Q14055 689 aaPredicted RBP13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 ZNF234Q14588 700 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 TRIP4Q15650 581 aaPredicted RBP13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 CBWD6Q4V339 395 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 COBLL1Q53SF7 1204 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 CCDC157Q569K6 752 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 CBWD3Q5JTY5 395 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 CBWD5Q5RIA9 395 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 ANKRD40Q6AI12 368 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 BHLHA9Q7RTU4 235 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 FAM124AQ86V42 546 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 TMPRSS6Q8IU80 811 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 PNPLA1Q8N8W4 532 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 RBBP8NLQ8NC74 664 aaPredicted RBP13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 DDI1Q8WTU0 396 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 NELFBQ8WX92 580 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 SNX19Q92543 992 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 SIPA1Q96FS4 1042 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 TSG101Q99816 390 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 GPR174Q9BXC1 333 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 ULBP1Q9BZM6 244 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 MSRB2Q9Y3D2 182 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 HBS1LQ9Y450 684 aaKnown RBP13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 DMXL2Q8TDJ6 3036 aa13.13□□□□□ -0.31
SMARCD2-207ENST00000578234 SPEGQ15772 3267 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 FAM221BA6H8Z2 402 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 KCNJ18B7U540 433 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 TULP2O00295 520 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 PSMA7O14818 248 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 SLC16A3O15427 465 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 IGLV3-19P01714 112 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 ACADMP11310 421 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 NCAM1P13591 858 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 HARS2P49590 506 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 TPMTP51580 245 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 COPAP53621 1224 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 ZNF445P59923 1031 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 FKBP3Q00688 224 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 BST2Q10589 180 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 CUL2Q13617 745 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 TRIP6Q15654 476 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 SGO2Q562F6 1265 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 CCDC183Q5T5S1 534 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 TCERG1LQ5VWI1 586 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 TMEM215Q68D42 235 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 SCML4Q8N228 414 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 PRCCQ92733 491 aaPredicted RBP13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 NUP58Q9BVL2 599 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 GTPBP4Q9BZE4 634 aaKnown RBP13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 CIPCQ9C0C6 399 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 LRRC4Q9HBW1 653 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 TMEM63CQ9P1W3 806 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 HESX1Q9UBX0 185 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 STOML2Q9UJZ1 356 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 TSPAN16Q9UKR8 245 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 KIAA1257Q9ULG3 409 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 CLEC4EQ9ULY5 219 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 WDFY3Q8IZQ1 3526 aa13.12□□□□□ -0.31
SMARCD2-207ENST00000578234 CKAP5Q14008 2032 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms