RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 MKRN2Q9H000 416 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ELOVL2Q9NXB9 296 aa17.38■□□□□ 0.37
CDK5RAP3-206ENST00000578018 SFMBT1Q9UHJ3 866 aa17.38■□□□□ 0.37
CDK5RAP3-206ENST00000578018 STOML2Q9UJZ1 356 aa17.38■□□□□ 0.37
CDK5RAP3-206ENST00000578018 SLC6A14Q9UN76 642 aa17.38■□□□□ 0.37
CDK5RAP3-206ENST00000578018 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CHD6Q8TD26 2715 aa17.38■□□□□ 0.37
CDK5RAP3-206ENST00000578018 MSI1O43347 362 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 KRT37O76014 449 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 LCP1P13796 627 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 HARS2P49590 506 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ZNF234Q14588 700 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 TMEM215Q68D42 235 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 KLHL10Q6JEL2 608 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 PMF1Q6P1K2 205 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 MSANTD2Q6P1R3 559 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 FOXR2Q6PJQ5 311 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 METTL3Q86U44 580 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 PPM1KQ8N3J5 372 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 DEFB124Q8NES8 71 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 SORCS1Q8WY21 1168 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ZNF419Q96HQ0 510 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CIPCQ9C0C6 399 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 PRDM16Q9HAZ2 1276 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ABCC13Q9NSE7 274 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 USP36Q9P275 1121 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 PCDHB4Q9Y5E5 795 aa17.37■□□□□ 0.37
CDK5RAP3-206ENST00000578018 NUMA1Q14980 2115 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 PPP1R3GB7ZBB8 358 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 M0QYV0 167 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 RNF225M0QZC1 329 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 P4HA2O15460 535 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 LATS1O95835 1130 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 PRKCHP24723 683 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 BRD2P25440 801 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CD6P30203 668 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 RGS7P49802 495 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ZNF445P59923 1031 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 GFPT1Q06210 699 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 MPPE1Q53F39 396 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 SLC35F5Q8WV83 523 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 NELFBQ8WX92 580 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 WASF3Q9UPY6 502 aa17.36■□□□□ 0.37
CDK5RAP3-206ENST00000578018 KNL1Q8NG31 2342 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 TSPAN3O60637 253 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 NDUFS2O75306 463 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CALCAP01258 141 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 IGLV3-27P01718 113 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 NCAM1P13591 858 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 HLA-FP30511 346 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 SEMA3BQ13214 749 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 MORC3Q14149 939 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 E2F5Q15329 346 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CNGA2Q16280 664 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ADGRF1Q5T601 910 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 PIP4P1Q86T03 277 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 TMPRSS6Q8IU80 811 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ARHGEF19Q8IW93 802 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 IRGQQ8WZA9 623 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 FOXJ1Q92949 421 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 GTPBP2Q9BX10 602 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 WSB2Q9NYS7 404 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CHMP5Q9NZZ3 219 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CTNND2Q9UQB3 1225 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 AKAP13Q12802 2813 aa17.35■□□□□ 0.37
CDK5RAP3-206ENST00000578018 BICDL2A1A5D9 508 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 UPK3BL1B0FP48 263 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 KCNJ18B7U540 433 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 UPK3BL2E5RIL1 263 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 PIK3R2O00459 728 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ARHGAP33O14559 1287 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 SYNCRIPO60506 623 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 SGSHP51688 502 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 COPAP53621 1224 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ATXN3P54252 364 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 GCNT1Q02742 428 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CETN1Q12798 172 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 FOXC1Q12948 553 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 STILQ15468 1287 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 SERPINA13PQ6UXR4 307 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CFAP47Q6ZTR5 3102 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 RRAGAQ7L523 313 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 TRIM59Q8IWR1 403 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 MINDY1Q8N5J2 469 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 WFIKKN2Q8TEU8 576 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 CLEC4CQ8WTT0 213 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 TOE1Q96GM8 510 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ITM2CQ9NQX7 267 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 SUSD2Q9UGT4 822 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 ASPMQ8IZT6 3477 aa17.34■□□□□ 0.37
CDK5RAP3-206ENST00000578018 BIN1O00499 593 aa17.33■□□□□ 0.36
CDK5RAP3-206ENST00000578018 TIMM44O43615 452 aa17.33■□□□□ 0.36
CDK5RAP3-206ENST00000578018 IGLV3-19P01714 112 aa17.33■□□□□ 0.36
CDK5RAP3-206ENST00000578018 LTFP02788 710 aa17.33■□□□□ 0.36
CDK5RAP3-206ENST00000578018 EPHX1P07099 455 aa17.33■□□□□ 0.36
CDK5RAP3-206ENST00000578018 TPMTP51580 245 aa17.33■□□□□ 0.36
CDK5RAP3-206ENST00000578018 MARSP56192 900 aaKnown RBP17.33■□□□□ 0.36
CDK5RAP3-206ENST00000578018 WDR45BQ5MNZ6 344 aa17.33■□□□□ 0.36
CDK5RAP3-206ENST00000578018 SYCP2LQ5T4T6 812 aa17.33■□□□□ 0.36
CDK5RAP3-206ENST00000578018 KIAA0907Q7Z7F0 614 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms