RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 ITGAVP06756 1048 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 ADCY8P40145 1251 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 ARSEP51690 589 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 HDAC4P56524 1084 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 MAP3K7CLP57077 242 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 TRIP13Q15645 432 aaPredicted RBP14.29□□□□□ -0.12
RNF43-202ENST00000577625 PLEKHG4Q58EX7 1191 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 GSTA5Q7RTV2 222 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 TRIM42Q8IWZ5 723 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 ALLCQ8N6M5 410 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 BBOF1Q8ND07 529 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 ZMIZ2Q8NF64 920 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 TBCBQ99426 244 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 SMOQ99835 787 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 RNF208Q9H0X6 261 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 LRRC4CQ9HCJ2 640 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.29□□□□□ -0.12
RNF43-202ENST00000577625 ZNF148Q9UQR1 794 aa14.29□□□□□ -0.12
RNF43-202ENST00000577625 FNDC1Q4ZHG4 1894 aaPredicted RBP14.28□□□□□ -0.12
RNF43-202ENST00000577625 CACNA2D1P54289 1103 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 EFHC1Q5JVL4 640 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 METTL23Q86XA0 190 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 ARHGAP18Q8N392 663 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 DBF4BQ8NFT6 615 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 CFAP61Q8NHU2 1237 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 ACTL9Q8TC94 416 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 NDRG1Q92597 394 aaKnown RBP14.28□□□□□ -0.12
RNF43-202ENST00000577625 CENPIQ92674 756 aaPredicted RBP14.28□□□□□ -0.12
RNF43-202ENST00000577625 HAUS1Q96CS2 278 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 PKMYT1Q99640 499 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 ACBD6Q9BR61 282 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 BEGAINQ9BUH8 593 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 DDX23Q9BUQ8 820 aaKnown RBP14.28□□□□□ -0.12
RNF43-202ENST00000577625 CALN1Q9BXU9 219 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 EPB41L4BQ9H329 900 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 TBC1D13Q9NVG8 400 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 TMEM161AQ9NX61 479 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 DSEQ9UL01 958 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 GMEB1Q9Y692 573 aa14.28□□□□□ -0.12
RNF43-202ENST00000577625 PQBP1O60828 265 aaKnown RBP14.27□□□□□ -0.12
RNF43-202ENST00000577625 UNC5CO95185 931 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 RARGP13631 454 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 CD151P48509 253 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 NDUFV1P49821 464 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 RABGGTBP53611 331 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 ITGA8P53708 1063 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 CDH6P55285 790 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 MRPS5P82675 430 aaKnown RBP14.27□□□□□ -0.12
RNF43-202ENST00000577625 OTUD4Q01804 1114 aaKnown RBP14.27□□□□□ -0.12
RNF43-202ENST00000577625 CCDC15Q0P6D6 951 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 PDK2Q15119 407 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 INTS6LQ5JSJ4 861 aaKnown RBP14.27□□□□□ -0.12
RNF43-202ENST00000577625 FOXB2Q5VYV0 432 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 FAM171BQ6P995 826 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 VSIG1Q86XK7 387 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 COLGALT2Q8IYK4 626 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 URGCPQ8TCY9 931 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 MYLPFQ96A32 169 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 LRRC4Q9HBW1 653 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 LRCH1Q9Y2L9 728 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 SLC4A7Q9Y6M7 1214 aa14.27□□□□□ -0.12
RNF43-202ENST00000577625 APOC4-APOC2K7ER74 178 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 ENPP3O14638 875 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 MDM4O15151 490 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 RGS16O15492 202 aaPredicted RBP14.27□□□□□ -0.13
RNF43-202ENST00000577625 APOC2P02655 101 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 VPS41P49754 854 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 DYNLT1P63172 113 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 MMRN1Q13201 1228 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 DPYSL3Q14195 570 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 TCTN1Q2MV58 587 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 OVOS1Q6IE37 1185 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 SCYL2Q6P3W7 929 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 GPRIN1Q7Z2K8 1008 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 LONP2Q86WA8 852 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 RFX6Q8HWS3 928 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 MAP7D3Q8IWC1 876 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 FITM2Q8N6M3 262 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 OR10T2Q8NGX3 314 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 DYDC1Q8WWB3 177 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 PTPRN2Q92932 1015 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 SMARCD1Q96GM5 515 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 KCNK16Q96T55 309 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 SNRNP25Q9BV90 132 aaKnown RBP14.27□□□□□ -0.13
RNF43-202ENST00000577625 RHOBTB2Q9BYZ6 727 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 STMN4Q9H169 189 aaPredicted RBP14.27□□□□□ -0.13
RNF43-202ENST00000577625 TXLNGQ9NUQ3 528 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 TRIM33Q9UPN9 1127 aa14.27□□□□□ -0.13
RNF43-202ENST00000577625 HHLA1C9JL84 531 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 TMEM189-UBE2V1I3L0A0 370 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 DAB1O75553 588 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 ATP5HO75947 161 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 COL6A1P12109 1028 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 TYMPP19971 482 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 GSTT1P30711 240 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 MATKP42679 507 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 PTDSS1P48651 473 aaKnown RBP14.26□□□□□ -0.13
RNF43-202ENST00000577625 TKTL1P51854 596 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 TFDP2Q14188 446 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 MUM1Q2TAK8 710 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms