RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 MAPK8IP1Q9UQF2 711 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 FNDC3AQ9Y2H6 1198 aaKnown RBP12.36□□□□□ -0.43
CDH8-202ENST00000577228 SPEGQ15772 3267 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 TIMM44O43615 452 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 CAPNS1P04632 268 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 ZNF883P0CG24 379 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 SYKP43405 635 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 MXI1P50539 228 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 TKTL1P51854 596 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 RAD23BP54727 409 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 BNC1Q01954 994 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 ADAM9Q13443 819 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 ACAP1Q15027 740 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 HLA-BQ31612 363 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 FNDC3BQ53EP0 1204 aaKnown RBP12.35□□□□□ -0.43
CDH8-202ENST00000577228 RAB41Q5JT25 222 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 ARHGAP17Q68EM7 881 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 FAM217AQ8IXS0 508 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 ANKRD52Q8NB46 1076 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 SLC4A11Q8NBS3 891 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 OR2T3Q8NH03 318 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 SEMA4DQ92854 862 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 FAXDC2Q96IV6 333 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 ARID3AQ99856 593 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 PCED1AQ9H1Q7 454 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 LHX5Q9H2C1 402 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 CCDC86Q9H6F5 360 aaKnown RBP12.35□□□□□ -0.43
CDH8-202ENST00000577228 TM7SF3Q9NS93 570 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 OLA1Q9NTK5 396 aaKnown RBP12.35□□□□□ -0.43
CDH8-202ENST00000577228 HPSEQ9Y251 543 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 CKAP5Q14008 2032 aa12.35□□□□□ -0.43
CDH8-202ENST00000577228 ANKRD11Q6UB99 2663 aaPredicted RBP12.34□□□□□ -0.43
CDH8-202ENST00000577228 A0A1B0GVT2 93 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 ZBED1O96006 694 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 HLA-EP13747 358 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
CDH8-202ENST00000577228 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
CDH8-202ENST00000577228 CAMK2GQ13555 558 aaPredicted RBP12.34□□□□□ -0.43
CDH8-202ENST00000577228 TRIP4Q15650 581 aaPredicted RBP12.34□□□□□ -0.43
CDH8-202ENST00000577228 GOLGA7BQ2TAP0 167 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 MPPE1Q53F39 396 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 TMEM215Q68D42 235 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 SLCO6A1Q86UG4 719 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 FMNL3Q8IVF7 1028 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 GUF1Q8N442 669 aaKnown RBP12.34□□□□□ -0.43
CDH8-202ENST00000577228 FBXL13Q8NEE6 735 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 C1orf216Q8TAB5 229 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 WFIKKN2Q8TEU8 576 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 CDC6Q99741 560 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 ULBP1Q9BZM6 244 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 LRRC4Q9HBW1 653 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 RAB20Q9NX57 234 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 GPSM3Q9Y4H4 160 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 PCDHGB2Q9Y5G2 931 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 ASPMQ8IZT6 3477 aa12.34□□□□□ -0.43
CDH8-202ENST00000577228 FLRT2O43155 660 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 STX10O60499 249 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 TSPAN3O60637 253 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 HLA-FP30511 346 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 CSNK1EP49674 416 aaKnown RBP12.33□□□□□ -0.44
CDH8-202ENST00000577228 AFF3P51826 1226 aaKnown RBP12.33□□□□□ -0.44
CDH8-202ENST00000577228 NDUFA8P51970 172 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 BCAT1P54687 386 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 ZNF445P59923 1031 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 DPYDQ12882 1025 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 TEAD4Q15561 434 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 ZCWPW2Q504Y3 356 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 PM20D1Q6GTS8 502 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 C19orf48Q6RUI8 117 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 BHLHA9Q7RTU4 235 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 BAHD1Q8TBE0 780 aaPredicted RBP12.33□□□□□ -0.44
CDH8-202ENST00000577228 RNF139Q8WU17 664 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 CYB5D2Q8WUJ1 264 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 NDRG1Q92597 394 aaKnown RBP12.33□□□□□ -0.44
CDH8-202ENST00000577228 SPATA32Q96LK8 384 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 IPO9Q96P70 1041 aaKnown RBP12.33□□□□□ -0.44
CDH8-202ENST00000577228 C6orf106Q9H6K1 298 aaPredicted RBP12.33□□□□□ -0.44
CDH8-202ENST00000577228 FBRSQ9HAH7 460 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 KIAA1522Q9P206 1035 aaPredicted RBP12.33□□□□□ -0.44
CDH8-202ENST00000577228 PLA2G4CQ9UP65 541 aa12.33□□□□□ -0.44
CDH8-202ENST00000577228 HBS1LQ9Y450 684 aaKnown RBP12.33□□□□□ -0.44
CDH8-202ENST00000577228 TULP2O00295 520 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 XPO1O14980 1071 aaKnown RBP12.32□□□□□ -0.44
CDH8-202ENST00000577228 ATXN1LP0C7T5 689 aaKnown RBP12.32□□□□□ -0.44
CDH8-202ENST00000577228 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
CDH8-202ENST00000577228 PABPC1P11940 636 aaKnown RBP12.32□□□□□ -0.44
CDH8-202ENST00000577228 CD19P15391 556 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 ACSL1P33121 698 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 MCCD1P59942 119 aaPredicted RBP12.32□□□□□ -0.44
CDH8-202ENST00000577228 KRT85P78386 507 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 PDE4CQ08493 712 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 ADIGQ0VDE8 80 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 BST2Q10589 180 aaKnown RBP12.32□□□□□ -0.44
CDH8-202ENST00000577228 SUZ12Q15022 739 aaKnown RBP12.32□□□□□ -0.44
CDH8-202ENST00000577228 KIF19Q2TAC6 998 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 EDRF1Q3B7T1 1238 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 CHST9Q7L1S5 443 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 SIX6OS1Q8N1H7 587 aa12.32□□□□□ -0.44
CDH8-202ENST00000577228 ZNF366Q8N895 744 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms