RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 LBRQ14739 615 aaKnown RBP18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 CHADLQ6NUI6 762 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 XRRA1Q6P2D8 792 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 MFN1Q8IWA4 741 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 ZNF570Q96NI8 536 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 B3GNT5Q9BYG0 378 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 NRDE2Q9H7Z3 1164 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 CYLDQ9NQC7 956 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 CPXM1Q96SM3 734 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 SNRNP25Q9BV90 132 aaKnown RBP18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 DMAC2Q9NW81 257 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 ZC3H4Q9UPT8 1303 aaKnown RBP18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 PSMB4P28070 264 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 NCKAP1LP55160 1127 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 MAP3K7CLP57077 242 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 PDK3Q15120 406 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 NEDD8Q15843 81 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 SLC15A2Q16348 729 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 UNC5AQ6ZN44 842 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 GPR141Q7Z602 305 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 BHLHE22Q8NFJ8 381 aaPredicted RBP18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 BLOC1S5Q8TDH9 187 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 BAZ2AQ9UIF9 1905 aaKnown RBP18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 BAIAP3O94812 1187 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 INSRRP14616 1297 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 ATP1A4Q13733 1029 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 AMIGO2Q86SJ2 522 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 PHF13Q86YI8 300 aaPredicted RBP18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 DEFB106AQ8N104 65 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 BHMTQ93088 406 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 TMEM109Q9BVC6 243 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 RUBCNLQ9H714 662 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 CAB39LQ9H9S4 337 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 TRPC7Q9HCX4 862 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 XPNPEP3Q9NQH7 507 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 SNTG2Q9NY99 539 aa18.35■□□□□ 0.53
ATPAF1-214ENST00000576409 TBX10O75333 385 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 PPM1JQ5JR12 505 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 SETD3Q86TU7 594 aaPredicted RBP18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 MAGEC3Q8TD91 643 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 HASPINQ8TF76 798 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 JADE3Q92613 823 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 COPS5Q92905 334 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 RICTORQ6R327 1708 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 ERI2A8K979 691 aaKnown RBP18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 CETPP11597 493 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 CYP2C9P11712 490 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 ME2P23368 584 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 ECHS1P30084 290 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 TMED10P49755 219 aaKnown RBP18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 SPIRE1Q08AE8 756 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 ADIGQ0VDE8 80 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 PLEKHA7Q6IQ23 1121 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 SH3BP5LQ7L8J4 393 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 TMC7Q7Z402 723 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 DHDDSQ86SQ9 333 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 RNF157Q96PX1 679 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 BARX2Q9UMQ3 279 aaPredicted RBP18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 RIPK3Q9Y572 518 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 UBIAD1Q9Y5Z9 338 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 MYO1GB0I1T2 1018 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 TIMM44O43615 452 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 LRCH4O75427 683 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 CCDC130P13994 396 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 GJC2Q5T442 439 aaPredicted RBP18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 C10orf107Q8IVU9 208 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 SIKE1Q9BRV8 207 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 BEGAINQ9BUH8 593 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 FRMD8P1Q9BZ68 369 aaPredicted RBP18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 NMRAL1Q9HBL8 299 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 ETAA1Q9NY74 926 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 F7P08709 466 aaPredicted RBP18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 HOXA10P31260 410 aaPredicted RBP18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 ALDH1A3P47895 512 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 TSPY1Q01534 308 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 OSMRQ99650 979 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 NAT9Q9BTE0 207 aa18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 OLA1Q9NTK5 396 aaKnown RBP18.34■□□□□ 0.53
ATPAF1-214ENST00000576409 AHCYL1O43865 530 aa18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 ZNF286BP0CG31 522 aa18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 GSCP56915 257 aaPredicted RBP18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 GALNTL6Q49A17 601 aa18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 RALGPS1Q5JS13 557 aa18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 UTS2BQ765I0 119 aa18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 MARK2Q7KZI7 788 aaKnown RBP18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 CEP19Q96LK0 163 aa18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 PORCNQ9H237 461 aa18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 BTBD7Q9P203 1132 aa18.33■□□□□ 0.53
ATPAF1-214ENST00000576409 INPP4BO15327 924 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 ALBP02768 609 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 CAPSQ13938 189 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 KIAA1841Q6NSI8 718 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 MIER2Q8N344 545 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 OR6J1Q8NGC5 347 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 PLEKHO2Q8TD55 490 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 SLC2A14Q8TDB8 520 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 DACH2Q96NX9 599 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 NCKIPSDQ9NZQ3 722 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms