RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 RPL34P49207 117 aaKnown RBP18.9■□□□□ 0.62
CHD3-214ENST00000572579 COPAP53621 1224 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 APBA1Q02410 837 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 ZNF234Q14588 700 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 MSANTD2Q6P1R3 559 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 KIAA0907Q7Z7F0 614 aaPredicted RBP18.9■□□□□ 0.62
CHD3-214ENST00000572579 SIX6OS1Q8N1H7 587 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 TRIML1Q8N9V2 468 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 OR2I1PQ8NGU4 316 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 WFDC5Q8TCV5 224 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 LMLNQ96KR4 655 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 ABCC13Q9NSE7 274 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 OLA1Q9NTK5 396 aaKnown RBP18.9■□□□□ 0.62
CHD3-214ENST00000572579 CYTH4Q9UIA0 394 aa18.9■□□□□ 0.62
CHD3-214ENST00000572579 KMT2BQ9UMN6 2715 aaPredicted RBP18.89■□□□□ 0.62
CHD3-214ENST00000572579 MAP1BP46821 2468 aaKnown RBP18.89■□□□□ 0.61
CHD3-214ENST00000572579 M0QYV0 167 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 AP5Z1O43299 807 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 TOP3BO95985 862 aaKnown RBP18.89■□□□□ 0.61
CHD3-214ENST00000572579 SLC6A4P31645 630 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 GPD2P43304 727 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 MAPK8P45983 427 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 NOVA1P51513 510 aaKnown RBP18.89■□□□□ 0.61
CHD3-214ENST00000572579 GCNT1Q02742 428 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 FAM133BQ5BKY9 247 aaKnown RBP18.89■□□□□ 0.61
CHD3-214ENST00000572579 ADGRF1Q5T601 910 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 NADSYN1Q6IA69 706 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 DENND1BQ6P3S1 775 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 RFWD3Q6PCD5 774 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 GJB7Q6PEY0 223 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 SLC36A4Q6YBV0 504 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 ANKS1BQ7Z6G8 1248 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 ADIPOR2Q86V24 386 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 IRF2BP1Q8IU81 584 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 RNF139Q8WU17 664 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 SLC2A11Q9BYW1 496 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 INTS2Q9H0H0 1204 aaKnown RBP18.89■□□□□ 0.61
CHD3-214ENST00000572579 ITM2CQ9NQX7 267 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 USP36Q9P275 1121 aaKnown RBP18.89■□□□□ 0.61
CHD3-214ENST00000572579 CACNA1BQ00975 2339 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 CACNA1EQ15878 2313 aa18.89■□□□□ 0.61
CHD3-214ENST00000572579 ASCC3Q8N3C0 2202 aaKnown RBP18.88■□□□□ 0.61
CHD3-214ENST00000572579 ZNF217O75362 1048 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 KRT37O76014 449 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 NCAM1P13591 858 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 HLA-EP13747 358 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 MAOBP27338 520 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 PPP1R2P41236 205 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 HARS2P49590 506 aaKnown RBP18.88■□□□□ 0.61
CHD3-214ENST00000572579 SHC2P98077 582 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 PAK1Q13153 545 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 PTPRNQ16849 979 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 UAP1L1Q3KQV9 507 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 MPPE1Q53F39 396 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 KIAA1324Q6UXG2 1013 aaKnown RBP18.88■□□□□ 0.61
CHD3-214ENST00000572579 METTL3Q86U44 580 aaKnown RBP18.88■□□□□ 0.61
CHD3-214ENST00000572579 SCUBE3Q8IX30 993 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 CYB5D2Q8WUJ1 264 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 IRGQQ8WZA9 623 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 TMA16Q96EY4 203 aaKnown RBP18.88■□□□□ 0.61
CHD3-214ENST00000572579 HSFY1Q96LI6 401 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 HSPA12BQ96MM6 686 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 MIS12Q9H081 205 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 WSB2Q9NYS7 404 aaPredicted RBP18.88■□□□□ 0.61
CHD3-214ENST00000572579 CEP295Q9C0D2 2601 aa18.88■□□□□ 0.61
CHD3-214ENST00000572579 BICDL2A1A5D9 508 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 AFPP02771 609 aaKnown RBP18.87■□□□□ 0.61
CHD3-214ENST00000572579 LTFP02788 710 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 CYBBP04839 570 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 PIK3R6Q5UE93 754 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 DAB2IPQ5VWQ8 1189 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 PIP4P1Q86T03 277 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 TMPRSS6Q8IU80 811 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 DEFB124Q8NES8 71 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 TOE1Q96GM8 510 aaKnown RBP18.87■□□□□ 0.61
CHD3-214ENST00000572579 NUSAP1Q9BXS6 441 aaKnown RBP18.87■□□□□ 0.61
CHD3-214ENST00000572579 CIPCQ9C0C6 399 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 TMEM245Q9H330 911 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 PRDM16Q9HAZ2 1276 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 SLC6A14Q9UN76 642 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 NAALADL1Q9UQQ1 740 aa18.87■□□□□ 0.61
CHD3-214ENST00000572579 PLXND1Q9Y4D7 1925 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 TNRC6BQ9UPQ9 1833 aaKnown RBP18.86■□□□□ 0.61
CHD3-214ENST00000572579 BECN2A8MW95 431 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 TIMM44O43615 452 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 CFIP05156 583 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 SERPINF2P08697 491 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 C7P10643 843 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 CSRP1P21291 193 aaKnown RBP18.86■□□□□ 0.61
CHD3-214ENST00000572579 CD6P30203 668 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 HOXD12P35452 270 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 TPMTP51580 245 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 LMAN2Q12907 356 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 CAMK4Q16566 473 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 DUOXA1Q1HG43 343 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 SYPL2Q5VXT5 272 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 ZNF366Q8N895 744 aa18.86■□□□□ 0.61
CHD3-214ENST00000572579 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHD3-214ENST00000572579 DQX1Q8TE96 717 aaKnown RBP18.86■□□□□ 0.61
CHD3-214ENST00000572579 FCRL2Q96LA5 508 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms