RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 SPPL2BQ8TCT7 592 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 CPT1BQ92523 772 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 PRCCQ92733 491 aaPredicted RBP12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 ZNF689Q96CS4 500 aaPredicted RBP12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 SMOC2Q9H3U7 446 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 NR2E3Q9Y5X4 410 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 HSPA1AP0DMV8 641 aaKnown RBP12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 HSPA1BP0DMV9 641 aaKnown RBP12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 TPI1P60174 286 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 BASP1P80723 227 aaKnown RBP12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 MORF4L2Q15014 288 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 ARL13BQ3SXY8 428 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 SYCP2LQ5T4T6 812 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 MFSD5Q6N075 450 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 DENND5BQ6ZUT9 1274 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 OTOP2Q7RTS6 562 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 RNF168Q8IYW5 571 aaPredicted RBP12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 SH2D3CQ8N5H7 860 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 CENPHQ9H3R5 247 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 FBXO44Q9H4M3 255 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 MTRRQ9UBK8 725 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 SHOC2Q9UQ13 582 aa12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 MRPL42Q9Y6G3 142 aaKnown RBP12.44□□□□□ -0.42
TOM1L1-213ENST00000572405 TCRBV7S3A2A0A539 114 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 BCLAF3A2AJT9 711 aaKnown RBP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 GOLGA8KD6RF30 607 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 DCLK1O15075 740 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 HAPLN1P10915 354 aaPredicted RBP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 STIP1P31948 543 aaKnown RBP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 OR1D2P34982 312 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 IFFO1Q0D2I5 559 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 EIF4EBP2Q13542 120 aaPredicted RBP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 BTG3Q14201 252 aaPredicted RBP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 SLC45A4Q5BKX6 768 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 KIAA1841Q6NSI8 718 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 CDKL3Q8IVW4 592 aaPredicted RBP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 TP53INP2Q8IXH6 220 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 FBXO32Q969P5 355 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 ZNF558Q96NG5 402 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 OLFM3Q96PB7 478 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 QKIQ96PU8 341 aaKnown RBP eCLIP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 RBM15Q96T37 977 aaKnown RBP eCLIP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 OR12D3Q9UGF7 316 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 GOLGA6CA6NDK9 693 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 TMEM63AO94886 807 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 LRIG2O94898 1065 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 NUDT17P0C025 328 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 GOLGA6DP0CG33 693 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 ERCC2P18074 760 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 ATF6P18850 670 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 NR2C2P49116 596 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 MTM1Q13496 603 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 FASTKD3Q14CZ7 662 aaKnown RBP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 HP1BP3Q5SSJ5 553 aaPredicted RBP12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 SLC8B1Q6J4K2 584 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 MON1AQ86VX9 555 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 PPIL6Q8IXY8 311 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 SLC39A11Q8N1S5 342 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 TMEM199Q8N511 208 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 CCDC110Q8TBZ0 833 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 GIPC2Q8TF65 315 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 RTP4Q96DX8 246 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 C9orf72Q96LT7 481 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 LGMNQ99538 433 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 GOLGA6AQ9NYA3 693 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 NINJ2Q9NZG7 142 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 PTPRSQ13332 1948 aa12.43□□□□□ -0.42
TOM1L1-213ENST00000572405 GREB1Q4ZG55 1949 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 CFAP69A5D8W1 941 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 BANF1O75531 89 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 MYZAPP0CAP1 466 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 VAV1P15498 845 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 YWHAQP27348 245 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 TAF10Q12962 218 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 KYNUQ16719 465 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 KRT71Q3SY84 523 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 FAXCQ5TGI0 409 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 TRMT10CQ7L0Y3 403 aaKnown RBP12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 NPWQ8N729 165 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 TMEM169Q96HH4 297 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 SIK2Q9H0K1 926 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 TSPYL1Q9H0U9 437 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 SAYSD1Q9NPB0 183 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 IL37Q9NZH6 218 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 XPO7Q9UIA9 1087 aaKnown RBP12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 GOLGA6L10A6NI86 522 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 SMIM23A6NLE4 172 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 TBX18O95935 607 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 MOCS2O96007 188 aaPredicted RBP12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 SOD2P04179 222 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 ACTN2P35609 894 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 SMARCB1Q12824 385 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 XRCC4Q13426 336 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 COLGALT1Q8NBJ5 622 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 YME1L1Q96TA2 773 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 EPAS1Q99814 870 aa12.42□□□□□ -0.42
TOM1L1-213ENST00000572405 CLSTN3Q9BQT9 956 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms